BLASTX nr result

ID: Lithospermum22_contig00023486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023486
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    62   6e-08
gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical ...    58   9e-07
ref|NP_564398.1| putative FBD-associated F-box protein [Arabidop...    58   9e-07
ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|3...    58   9e-07
ref|XP_003629435.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   6e-06

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 448 NLTKLK-IASSFFEFVLLQNFMENSINVESIALEKHYKILRQPHQVPWNEPQHLPKCFLT 272
           N+T+L+ +    F +  L NF+ +S N+E++ +E  Y     P    W  P  +P C + 
Sbjct: 333 NMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEG--WLMPLQVPACLVL 390

Query: 271 SLREVVIKGYRSKA-ESQMVKYVLGYGEILERMEISCSDNDIDHKYHMIQNILKFPRASR 95
            L+E+ I+    +  E + V+Y+L   E+L++M I C ++ +D ++ + + +L  PR SR
Sbjct: 391 HLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSR 450

Query: 94  RCEV 83
            C V
Sbjct: 451 SCFV 454


>gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical protein T25K17.150 gi|7487424
           from Arabidopsis thaliana BAC T25K17 gb|AL049171
           [Arabidopsis thaliana]
          Length = 536

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = -3

Query: 445 LTKLKIASSFFEFV-LLQNFMENSINVESIALEKHYKILRQPHQVPWNEPQHLPKCFLTS 269
           L +L I +   E++ LL   + +S  +  + L K++       +  WNEP  +P+C LTS
Sbjct: 411 LVRLTICTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQPRPCWNEPSAVPECLLTS 470

Query: 268 LREVV-IKGYRSKAESQMVKYVLGYGEILERMEISCSDNDIDHKYHMIQNILKFPRASRR 92
           L  +  +K   ++ E ++  ++L  G  L+++ IS    DI+ K+ M++ +    R S  
Sbjct: 471 LETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEMLKELSLLFRRSPT 530

Query: 91  CEVSF 77
           C+++F
Sbjct: 531 CQIAF 535


>ref|NP_564398.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|302425238|sp|Q9LQM1.2|FBD39_ARATH RecName:
           Full=Probable FBD-associated F-box protein At1g32375
           gi|332193353|gb|AEE31474.1| putative FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 422

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = -3

Query: 445 LTKLKIASSFFEFV-LLQNFMENSINVESIALEKHYKILRQPHQVPWNEPQHLPKCFLTS 269
           L +L I +   E++ LL   + +S  +  + L K++       +  WNEP  +P+C LTS
Sbjct: 297 LVRLTICTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQPRPCWNEPSAVPECLLTS 356

Query: 268 LREVV-IKGYRSKAESQMVKYVLGYGEILERMEISCSDNDIDHKYHMIQNILKFPRASRR 92
           L  +  +K   ++ E ++  ++L  G  L+++ IS    DI+ K+ M++ +    R S  
Sbjct: 357 LETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEMLKELSLLFRRSPT 416

Query: 91  CEVSF 77
           C+++F
Sbjct: 417 CQIAF 421


>ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|355512664|gb|AES94287.1|
           Cyclin-like F-box [Medicago truncatula]
          Length = 318

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -3

Query: 400 LQNFMENSINVESIALEKHYKILRQPHQVPWNEPQHLPKCFLTSLREVVIKGYR-SKAES 224
           L   +++   ++ + L+K Y+  R  H   W EPQ +PKC  + LR   + GY+ S  E 
Sbjct: 212 LVELLQHCPKLQDLTLQKLYERQRDEHD--WGEPQTVPKCLSSQLRTCSLIGYKGSNCEL 269

Query: 223 QMVKYVLGYGEILERMEISCSDNDIDHKYHMIQNILKF 110
              +Y+L   ++L+ M+IS S + +  K+HM+  +  F
Sbjct: 270 LFAEYILKNAKVLQTMKISTSSSVLHKKHHMLMKLSVF 307


>ref|XP_003629435.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355523457|gb|AET03911.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = -3

Query: 448 NLTKLKIASSFFEFVLLQNFMENSINVESIALEKHYKILRQPHQVPWNEPQHLPKCFLTS 269
           NL +L++   +F F  L N ++    ++ + ++K+ K         W+  Q +P C ++ 
Sbjct: 253 NLVRLELILPWFRFNYLLNLLQECPMLQVLMIQKNKK---SSPISGWHPKQIVPDCLVSH 309

Query: 268 LREVVIKGYR-SKAESQMVKYVLGYGEILERMEISCSDNDIDHKYHMIQNILKFPRASRR 92
           L  +  KG+R S  E   V++VL  G +L+ + IS    +   KY +++ +   PRAS  
Sbjct: 310 LTVIEFKGFRGSPDEVSFVEHVLQKGLVLKTLIISDISLNQSKKYGVLKRLSNVPRASET 369

Query: 91  CEVSF 77
           C+++F
Sbjct: 370 CQLTF 374


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