BLASTX nr result

ID: Lithospermum22_contig00023476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023476
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   112   1e-22
ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        112   1e-22
ref|XP_004164059.1| PREDICTED: protein DGCR14 homolog, partial [...   110   3e-22
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...   110   3e-22

>ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  112 bits (281), Expect = 6e-23
 Identities = 71/141 (50%), Positives = 80/141 (56%), Gaps = 19/141 (13%)
 Frame = -1

Query: 431 MLSSPGKSPRH-------------XXXXXXXXXXXXXXXXPKKQSTVLDEDTYVAAIEKI 291
           ML SPG SPRH                             P K  TVLDEDTYVA IEKI
Sbjct: 1   MLLSPGHSPRHLSSPSPYSNSENTLQISSNSSSINNTPINPSKHPTVLDEDTYVATIEKI 60

Query: 290 IERDFFPDIPKLRDRLDWLEAVRSRDPLQIRDAQLKILERR-RAIKKP-----XXXXSNL 129
           IERDFFPDI KLRDRLDWLEA++S DP+QIRDAQLKI+ERR + +  P         +  
Sbjct: 61  IERDFFPDISKLRDRLDWLEAMKSGDPIQIRDAQLKIMERRGKKVNNPSSDGSFRSRNRT 120

Query: 128 TTPVSAFFRNSLSITPFSRFN 66
            TP S F R   S+TPF  F+
Sbjct: 121 QTPGSTFMR---SLTPFDEFD 138


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score =  112 bits (279), Expect = 1e-22
 Identities = 72/149 (48%), Positives = 84/149 (56%), Gaps = 22/149 (14%)
 Frame = -1

Query: 431 MLSSPGKSPRHXXXXXXXXXXXXXXXXP--------------KKQSTVLDEDTYVAAIEK 294
           ML SPG SPRH                               +K++ VLDEDTYVAAIEK
Sbjct: 1   MLLSPGHSPRHLSSPSPGPSTNSEIALQTSNKSTITTTPSNHRKRARVLDEDTYVAAIEK 60

Query: 293 IIERDFFPDIPKLRDRLDWLEAVRSRDPLQIRDAQLKILERR-RAIKKPXXXXSNLT--- 126
           IIERDFFPDI KLRDRLDWLEAV++ DP+QIRDAQLKI+ERR + +       S  T   
Sbjct: 61  IIERDFFPDISKLRDRLDWLEAVKTGDPIQIRDAQLKIIERRGKRVNSSNSDGSTQTRNR 120

Query: 125 ----TPVSAFFRNSLSITPFSRFNEGNSS 51
               TP S F RN   + PF  F+  NS+
Sbjct: 121 SQTQTPGSTFMRN---LNPFDEFDIINSN 146


>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  112 bits (279), Expect = 1e-22
 Identities = 68/131 (51%), Positives = 78/131 (59%), Gaps = 13/131 (9%)
 Frame = -1

Query: 431 MLSSPGKSPRHXXXXXXXXXXXXXXXXP-----------KKQSTVLDEDTYVAAIEKIIE 285
           ML SPG SPRH                            +K+ TVLDEDTYVAAIEKI+E
Sbjct: 1   MLLSPGHSPRHLSSPSPSLSEKPQQNRNSSSVLNVSANPRKEVTVLDEDTYVAAIEKIVE 60

Query: 284 RDFFPDIPKLRDRLDWLEAVRSRDPLQIRDAQLKILER--RRAIKKPXXXXSNLTTPVSA 111
           RDFFPDIPKLRDRL+WLEAVRS DPL+IRD QLKI +R  R+A+       +   TP S 
Sbjct: 61  RDFFPDIPKLRDRLEWLEAVRSGDPLRIRDVQLKIRDRRGRKALNCAETERNRSRTPGST 120

Query: 110 FFRNSLSITPF 78
           F R   + TPF
Sbjct: 121 FTR---TFTPF 128


>ref|XP_004164059.1| PREDICTED: protein DGCR14 homolog, partial [Cucumis sativus]
          Length = 410

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/133 (49%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
 Frame = -1

Query: 431 MLSSPGKSPRHXXXXXXXXXXXXXXXXPKKQST------------VLDEDTYVAAIEKII 288
           ML SPG SPRH                 +  S+            VLDED+YV AIEKII
Sbjct: 1   MLLSPGHSPRHISSPSPSTVSENAIQTLQSSSSITTPQSSRKHPKVLDEDSYVEAIEKII 60

Query: 287 ERDFFPDIPKLRDRLDWLEAVRSRDPLQIRDAQLKILERRRAIKKPXXXXSNLTTPVSAF 108
           ERD+FPDI KLRDRLDWLEA++S DP+ IRDAQLKI+ERR    K         TP S F
Sbjct: 61  ERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLKIMERRGQKVKRLNPDGKSQTPGSTF 120

Query: 107 FRNSLSITPFSRF 69
            R   S TPF  F
Sbjct: 121 MR---SFTPFDEF 130


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/133 (49%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
 Frame = -1

Query: 431 MLSSPGKSPRHXXXXXXXXXXXXXXXXPKKQST------------VLDEDTYVAAIEKII 288
           ML SPG SPRH                 +  S+            VLDED+YV AIEKII
Sbjct: 1   MLLSPGHSPRHISSPSPSTVSENAIQTLQSSSSITTPQSSRKHPKVLDEDSYVEAIEKII 60

Query: 287 ERDFFPDIPKLRDRLDWLEAVRSRDPLQIRDAQLKILERRRAIKKPXXXXSNLTTPVSAF 108
           ERD+FPDI KLRDRLDWLEA++S DP+ IRDAQLKI+ERR    K         TP S F
Sbjct: 61  ERDYFPDISKLRDRLDWLEAIKSADPILIRDAQLKIMERRGQKVKRLNPDGKSQTPGSTF 120

Query: 107 FRNSLSITPFSRF 69
            R   S TPF  F
Sbjct: 121 MR---SFTPFDEF 130


Top