BLASTX nr result

ID: Lithospermum22_contig00023441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023441
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264036.2| PREDICTED: exportin-2-like [Vitis vinifera]       108   4e-22
emb|CAN67739.1| hypothetical protein VITISV_016128 [Vitis vinifera]   108   4e-22
ref|XP_002523327.1| importin-alpha re-exporter, putative [Ricinu...   100   1e-19
ref|XP_002301415.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002320205.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_002264036.2| PREDICTED: exportin-2-like [Vitis vinifera]
          Length = 979

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 11/93 (11%)
 Frame = -1

Query: 248  FNTLVSSPSRDEQGLYVLNTVIENLGYDVLST*VSHIWVS-----------KFTTSLLIF 102
            F  L+SS + DEQG YVLNTVIENLGY+V++  VSHIW +           KF  S LIF
Sbjct: 743  FERLISSHTTDEQGFYVLNTVIENLGYEVIAPYVSHIWATLFGRLQKNRTVKFVKSFLIF 802

Query: 101  MSLFMVKYGCVNLVNSMNAVQPDVFRAILEQFW 3
            MSLF+VK+G  NLV+S+NAVQP++F  ILEQFW
Sbjct: 803  MSLFLVKHGSTNLVDSINAVQPNIFLVILEQFW 835


>emb|CAN67739.1| hypothetical protein VITISV_016128 [Vitis vinifera]
          Length = 979

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 11/93 (11%)
 Frame = -1

Query: 248  FNTLVSSPSRDEQGLYVLNTVIENLGYDVLST*VSHIWVS-----------KFTTSLLIF 102
            F  L+SS + DEQG YVLNTVIENLGY+V++  VSHIW +           KF  S LIF
Sbjct: 743  FERLISSHTTDEQGFYVLNTVIENLGYEVIAPYVSHIWATLFGRLQKNRTVKFVKSFLIF 802

Query: 101  MSLFMVKYGCVNLVNSMNAVQPDVFRAILEQFW 3
            MSLF+VK+G  NLV+S+NAVQP++F  ILEQFW
Sbjct: 803  MSLFLVKHGSTNLVDSINAVQPNIFLVILEQFW 835


>ref|XP_002523327.1| importin-alpha re-exporter, putative [Ricinus communis]
            gi|223537415|gb|EEF39043.1| importin-alpha re-exporter,
            putative [Ricinus communis]
          Length = 969

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
 Frame = -1

Query: 248  FNTLVSSPSRDEQGLYVLNTVIENLGYDVLST*VSHIWVS-----------KFTTSLLIF 102
            F+ LVSSPS DEQG YVLNTVIENL Y V+   V  IW +           KF  S LIF
Sbjct: 733  FSMLVSSPSTDEQGFYVLNTVIENLDYSVIDRHVVKIWSTLFTRLQNKRTVKFVKSFLIF 792

Query: 101  MSLFMVKYGCVNLVNSMNAVQPDVFRAILEQFW 3
            MSLF+VK+G   LV+++NAVQP++F  ILEQFW
Sbjct: 793  MSLFLVKHGSAKLVDTINAVQPNIFMVILEQFW 825


>ref|XP_002301415.1| predicted protein [Populus trichocarpa] gi|222843141|gb|EEE80688.1|
            predicted protein [Populus trichocarpa]
          Length = 969

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
 Frame = -1

Query: 248  FNTLVSSPSRDEQGLYVLNTVIENLGYDVLST*VSHIWVSKFTT-----------SLLIF 102
            FN LVS PS DEQG +VLNTVIENL Y  ++  V HIW + FT            SLLIF
Sbjct: 733  FNRLVSVPSTDEQGFFVLNTVIENLDYGAIAPYVGHIWNALFTRLQSKRTVKYIKSLLIF 792

Query: 101  MSLFMVKYGCVNLVNSMNAVQPDVFRAILEQFW 3
            +SLF+VK+G  NLV+SMN+VQ  +F  ILEQFW
Sbjct: 793  ISLFLVKHGFANLVDSMNSVQAGIFLVILEQFW 825


>ref|XP_002320205.1| predicted protein [Populus trichocarpa] gi|222860978|gb|EEE98520.1|
            predicted protein [Populus trichocarpa]
          Length = 969

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 11/92 (11%)
 Frame = -1

Query: 248  FNTLVSSPSRDEQGLYVLNTVIENLGYDVLST*VSHIW-----------VSKFTTSLLIF 102
            FN LVS+PS DEQG YVLNTVIENL Y  ++  V HIW             KF  SL IF
Sbjct: 733  FNRLVSAPSTDEQGFYVLNTVIENLDYGTIAPYVGHIWNALFSRLQSKRTVKFIKSLSIF 792

Query: 101  MSLFMVKYGCVNLVNSMNAVQPDVFRAILEQF 6
            MSLF+VK+G  NLV+SMN+VQ  +F  ILEQF
Sbjct: 793  MSLFVVKHGSANLVDSMNSVQAGIFLVILEQF 824


Top