BLASTX nr result

ID: Lithospermum22_contig00023418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023418
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175365.1| small subunit ribosomal protein S17 [Arabidopsi...   158   1e-36
ref|XP_002891503.1| EMB1129 [Arabidopsis lyrata subsp. lyrata] g...   157   3e-36
ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   156   6e-36
ref|XP_002444431.1| hypothetical protein SORBIDRAFT_07g021830 [S...   154   2e-35
ref|XP_003558605.1| PREDICTED: 30S ribosomal protein S17-like [B...   153   4e-35

>ref|NP_175365.1| small subunit ribosomal protein S17 [Arabidopsis thaliana]
           gi|5430760|gb|AAD43160.1|AC007504_15 Putative ribosomal
           protein [Arabidopsis thaliana]
           gi|26451230|dbj|BAC42717.1| unknown protein [Arabidopsis
           thaliana] gi|28827672|gb|AAO50680.1| putative 40S
           ribosomal protein S17 [Arabidopsis thaliana]
           gi|332194304|gb|AEE32425.1| small subunit ribosomal
           protein S17 [Arabidopsis thaliana]
          Length = 116

 Score =  158 bits (400), Expect = 1e-36
 Identities = 76/116 (65%), Positives = 95/116 (81%)
 Frame = +3

Query: 15  MKPVVGVVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDENDQCHIGDRVRLDPS 194
           MKPV+G VVSNKMQKSVVVAVDRLFHNK+YNRYVKRTSKFMAHD+ D C+IGDRV+LDPS
Sbjct: 1   MKPVIGTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAHDDKDACNIGDRVKLDPS 60

Query: 195 RPLSKHKNWVVAEILKKAQIYTRGSYGSMSSTDNTAEGSVTAGSSSNTGVPASPSS 362
           RPLSK+K+W+VAEI+KKA+IY+  +  +  S   +A  + T  SS+ + +P S +S
Sbjct: 61  RPLSKNKHWIVAEIIKKARIYSPKAAAAAVSASASASSASTTDSSAQSQIPPSSTS 116


>ref|XP_002891503.1| EMB1129 [Arabidopsis lyrata subsp. lyrata]
           gi|297337345|gb|EFH67762.1| EMB1129 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 116

 Score =  157 bits (397), Expect = 3e-36
 Identities = 76/116 (65%), Positives = 95/116 (81%)
 Frame = +3

Query: 15  MKPVVGVVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDENDQCHIGDRVRLDPS 194
           MKPV+G VVSNKMQKSVVVAVDRLFHNK+YNRYVKRTSKFMAHD+ D C+IGDRV+LDPS
Sbjct: 1   MKPVIGTVVSNKMQKSVVVAVDRLFHNKLYNRYVKRTSKFMAHDDKDACNIGDRVKLDPS 60

Query: 195 RPLSKHKNWVVAEILKKAQIYTRGSYGSMSSTDNTAEGSVTAGSSSNTGVPASPSS 362
           RPLSK+K+WVVAEI+KKA+IY+  +  +     ++A  +  A SS+ + +P S +S
Sbjct: 61  RPLSKNKHWVVAEIIKKARIYSPEAAAAAVVASSSASSASIADSSAQSQIPPSSTS 116


>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  156 bits (394), Expect = 6e-36
 Identities = 81/106 (76%), Positives = 89/106 (83%)
 Frame = +3

Query: 15  MKPVVGVVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDENDQCHIGDRVRLDPS 194
           MK VVG+VVSNKMQKSVVVAVDRLFH+K+YNRYVKRTSKFMAHDEND C+IGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENDLCNIGDRVRLDPS 60

Query: 195 RPLSKHKNWVVAEILKKAQIYTRGSYGSMSSTDNTAEGSVTAGSSS 332
           RPLSK K+WVVAEILKKA+IY   S G  S   NTA    +A S+S
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSAGD-SGASNTAGMKASASSTS 105


>ref|XP_002444431.1| hypothetical protein SORBIDRAFT_07g021830 [Sorghum bicolor]
           gi|241940781|gb|EES13926.1| hypothetical protein
           SORBIDRAFT_07g021830 [Sorghum bicolor]
          Length = 104

 Score =  154 bits (390), Expect = 2e-35
 Identities = 73/97 (75%), Positives = 87/97 (89%)
 Frame = +3

Query: 15  MKPVVGVVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDENDQCHIGDRVRLDPS 194
           MKPVVG+VVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDE+D C+IGDRVRLDPS
Sbjct: 1   MKPVVGIVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDEDDSCNIGDRVRLDPS 60

Query: 195 RPLSKHKNWVVAEILKKAQIYTRGSYGSMSSTDNTAE 305
           RPLS+HK+WVVAEIL++A++Y   +  + S  D+ ++
Sbjct: 61  RPLSRHKHWVVAEILRRAKVYVPPAATAPSEHDSKSQ 97


>ref|XP_003558605.1| PREDICTED: 30S ribosomal protein S17-like [Brachypodium distachyon]
          Length = 106

 Score =  153 bits (387), Expect = 4e-35
 Identities = 76/106 (71%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
 Frame = +3

Query: 15  MKPVVGVVVSNKMQKSVVVAVDRLFHNKMYNRYVKRTSKFMAHDENDQCHIGDRVRLDPS 194
           MKPVVG+VVSNKMQKSVVVAVDRLFHNK+YNRYVKRTSKFMAHDE D C+IGDRVRLDPS
Sbjct: 1   MKPVVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAHDETDDCNIGDRVRLDPS 60

Query: 195 RPLSKHKNWVVAEILKKAQIYTRGSYGSMSS-TDNTAEGSVTAGSS 329
           RPLSK+K+WVVAE+L++A++Y   S  + SS   +TA+ + T  S+
Sbjct: 61  RPLSKNKHWVVAEVLRRAKMYVPPSAATASSELGSTAQQAATKSSA 106


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