BLASTX nr result

ID: Lithospermum22_contig00023353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023353
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511433.1| ring finger protein, putative [Ricinus commu...    93   2e-17
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...    93   3e-17
ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like...    93   3e-17
ref|XP_002321581.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
           gi|223550548|gb|EEF52035.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/93 (47%), Positives = 62/93 (66%)
 Frame = -2

Query: 280 VMVVIIVIAILFFMFSLLHFFIKYLIKRSVFSSISQSNMYXXXXXXXXXXXXXXXXXXXX 101
           +++VII++A++FF+  +LH  ++ L+KRS FS+I  SN Y                    
Sbjct: 54  ILLVIIILAVIFFVSGVLHLLVRCLLKRSHFSAIFHSNRYPEISRSHSLQRQLQQLFRQH 113

Query: 100 DSGLDQSLIDSLPVFYYKEIVGSKEPFDCAVCL 2
           DSGLDQ+ +D+LPVFYYK+I+G KEPFDCAVCL
Sbjct: 114 DSGLDQAFVDALPVFYYKDIMGLKEPFDCAVCL 146


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 60/93 (64%)
 Frame = -2

Query: 280 VMVVIIVIAILFFMFSLLHFFIKYLIKRSVFSSISQSNMYXXXXXXXXXXXXXXXXXXXX 101
           V+ +I+++A++FF+  LLH  +++L+K    SSISQSN Y                    
Sbjct: 58  VLFIIVILAVIFFISGLLHLLVRFLVKHRSSSSISQSNRYQETSSSHAFQRQLQQLFHLH 117

Query: 100 DSGLDQSLIDSLPVFYYKEIVGSKEPFDCAVCL 2
           DSGLDQ+ ID+LPVF YK+IVG KEPFDCAVCL
Sbjct: 118 DSGLDQAFIDALPVFLYKDIVGLKEPFDCAVCL 150


>ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 376

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 VMVVIIVIAILFFMFSLLHFFIKYLIKR--SVFSSISQSNMYXXXXXXXXXXXXXXXXXX 107
           ++V+I+++A++FF+   LH  +++LIK+  S  SSISQSN Y                  
Sbjct: 59  ILVIIVILAVVFFILGFLHLLVRFLIKQRSSSNSSISQSNRYPDMSESDAYQRQLQQLFH 118

Query: 106 XXDSGLDQSLIDSLPVFYYKEIVGSKEPFDCAVCL 2
             DSGLDQ+ ID+LPVF+YKEI+G KEPFDCAVCL
Sbjct: 119 LHDSGLDQAFIDALPVFFYKEIIGLKEPFDCAVCL 153


>ref|XP_002321581.1| predicted protein [Populus trichocarpa] gi|222868577|gb|EEF05708.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/93 (47%), Positives = 62/93 (66%)
 Frame = -2

Query: 280 VMVVIIVIAILFFMFSLLHFFIKYLIKRSVFSSISQSNMYXXXXXXXXXXXXXXXXXXXX 101
           +++VI V+A++FF+  LLH  +++L+KR+ FS I  SN +                    
Sbjct: 6   LLLVIGVLAVIFFVSGLLHLLVRFLLKRASFSPIYHSNRFPETSGSHSIQRQLQQLFRLH 65

Query: 100 DSGLDQSLIDSLPVFYYKEIVGSKEPFDCAVCL 2
           DSGLDQ+ +D+LPVFYYK+I+GSKEPFDCAVCL
Sbjct: 66  DSGLDQAFVDALPVFYYKDIMGSKEPFDCAVCL 98


>ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|222845773|gb|EEE83320.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/93 (50%), Positives = 58/93 (62%)
 Frame = -2

Query: 280 VMVVIIVIAILFFMFSLLHFFIKYLIKRSVFSSISQSNMYXXXXXXXXXXXXXXXXXXXX 101
           V+ VI+++A+LFF+  LLH  I++LIK    S+ SQSN Y                    
Sbjct: 16  VLFVIVILAVLFFISGLLHLLIRFLIKHPTSSAASQSNRYPEISGSDALQRQLQQLFHLH 75

Query: 100 DSGLDQSLIDSLPVFYYKEIVGSKEPFDCAVCL 2
           DSGLDQ+ ID+LPVF YKEIVG KEPFDC VCL
Sbjct: 76  DSGLDQAFIDALPVFQYKEIVGPKEPFDCPVCL 108


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