BLASTX nr result

ID: Lithospermum22_contig00023190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023190
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   166   6e-39
ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   165   2e-38
ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana] ...   163   7e-38
ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   158   2e-36
ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arab...   155   1e-35

>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  166 bits (421), Expect = 6e-39
 Identities = 102/219 (46%), Positives = 120/219 (54%)
 Frame = -1

Query: 901 SKSSLVELLRKTSKNPEGLVLMETCSLYPRAPILASTPTKKFLLYPSSISTRNSYQIQFG 722
           S SS + LL  +  N     L+E  S +      + +P K+   +P  IS +N Y  Q+ 
Sbjct: 14  SSSSTISLLSSSKINS----LLEQASTFT----FSLSPIKQASQFP--ISKQNFYPNQYH 63

Query: 721 VPRLTSISATLNSPKGFGXXXXXXXXXXXXXKGYXXXXXXXXXXXXXXXXXDSDTVIPEI 542
                 + ATLNSP+GFG                                     +IPE+
Sbjct: 64  FSYPKPLYATLNSPRGFGPSPKKTKRTKKLKT--VNPNDDDDDDNNDDDDEQDAGIIPEV 121

Query: 541 VTNRMISRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTFIPVIVSFIFFGTALLGVSY 362
           VTNRMISRMG S                 LKVGLKIDVPT++P IVSF FFGTALLGVSY
Sbjct: 122 VTNRMISRMGFSVGVPLFIGLLFFPFFYYLKVGLKIDVPTWVPYIVSFFFFGTALLGVSY 181

Query: 361 GIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWGGSRKK 245
           GIVSSSWDP+REGSLLGWNEA+KNWPVFWQSFWG S KK
Sbjct: 182 GIVSSSWDPMREGSLLGWNEAQKNWPVFWQSFWGRSGKK 220


>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  165 bits (417), Expect = 2e-38
 Identities = 91/175 (52%), Positives = 106/175 (60%)
 Frame = -1

Query: 769 YPSSISTRNSYQIQFGVPRLTSISATLNSPKGFGXXXXXXXXXXXXXKGYXXXXXXXXXX 590
           +P+   T N  Q Q    R TS++ATL  PKGFG             +G           
Sbjct: 40  FPNLRPTINQNQNQTHTNRPTSLNATLRRPKGFGPASRKKKTKKTRREG-SEDDDNEEEE 98

Query: 589 XXXXXXXDSDTVIPEIVTNRMISRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTFIPV 410
                  +   VIPE+VTNRM+SRMG +                 LKVGLKIDVP+++PV
Sbjct: 99  EEDEEEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPV 158

Query: 409 IVSFIFFGTALLGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWGGSRKK 245
           IVSF FFG+ALLGVSYGIVSSSWDPLREGSLLGWNEA+KNWPVFW+S WGGS KK
Sbjct: 159 IVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKNWPVFWKSIWGGSNKK 213


>ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75098840|sp|O49668.1|PAM68_ARATH RecName:
           Full=Protein PAM68, chloroplastic; AltName:
           Full=PHOTOSYNTHESIS AFFECTED MUTANT 68; Flags: Precursor
           gi|2828285|emb|CAA16699.1| putative protein [Arabidopsis
           thaliana] gi|7268705|emb|CAB78912.1| putative protein
           [Arabidopsis thaliana] gi|119360097|gb|ABL66777.1|
           At4g19100 [Arabidopsis thaliana]
           gi|332658740|gb|AEE84140.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 214

 Score =  163 bits (412), Expect = 7e-38
 Identities = 92/176 (52%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
 Frame = -1

Query: 766 PSSISTRNSYQIQFGVPRLTSISATLNSPKGFGXXXXXXXXXXXXXKGYXXXXXXXXXXX 587
           P SI+  N  +I     R+  + AT+NSPKGFG              G            
Sbjct: 43  PKSITCINRLEIS----RIAPLHATMNSPKGFGPPPKKTKKSKKPKPGNQSDEDDDDEDE 98

Query: 586 XXXXXXDSDT--VIPEIVTNRMISRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTFIP 413
                 D     VIPEIVTNRMISRMG +                 LKVGLK+DVPT++P
Sbjct: 99  DDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVP 158

Query: 412 VIVSFIFFGTALLGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWGGSRKK 245
            IVSF+FFGTAL GVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFW  S K+
Sbjct: 159 FIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWNSSDKR 214


>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  158 bits (400), Expect = 2e-36
 Identities = 98/201 (48%), Positives = 110/201 (54%), Gaps = 3/201 (1%)
 Frame = -1

Query: 838 METCSLYPRAPILA---STPTKKFLLYPSSISTRNSYQIQFGVPRLTSISATLNSPKGFG 668
           ME CS     P+++   STP      +P  IST   Y  +  +   T   A+LN PKGFG
Sbjct: 1   MECCSFSTTTPLISPPSSTPALYISQFP--ISTPKLYS-KNRLLHSTPPCASLNRPKGFG 57

Query: 667 XXXXXXXXXXXXXKGYXXXXXXXXXXXXXXXXXDSDTVIPEIVTNRMISRMGLSXXXXXX 488
                        K Y                   + VIPEIVTNRMISRMG S      
Sbjct: 58  PSPRKTEKRKKLKKNYSDDEDEEEEEEEGAEA--EEGVIPEIVTNRMISRMGFSVGIPLM 115

Query: 487 XXXXXXXXXXXLKVGLKIDVPTFIPVIVSFIFFGTALLGVSYGIVSSSWDPLREGSLLGW 308
                      LKVGLKIDVPT++P IVSF FFG+ALLGVSYGIVSSSWDPLREGS LGW
Sbjct: 116 IGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFLGW 175

Query: 307 NEAKKNWPVFWQSFWGGSRKK 245
            EA+ NWPVFWQS WG S KK
Sbjct: 176 TEAQNNWPVFWQSLWGRSGKK 196


>ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arabidopsis lyrata subsp.
           lyrata] gi|297315836|gb|EFH46259.1| hypothetical protein
           ARALYDRAFT_492947 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  155 bits (393), Expect = 1e-35
 Identities = 89/176 (50%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
 Frame = -1

Query: 766 PSSISTRNSYQIQFGVPRLTSISATLNSPKGFGXXXXXXXXXXXXXKGYXXXXXXXXXXX 587
           P SI+  N  +I     R++ + AT+NSP+GFG              G            
Sbjct: 43  PKSITCNNRLEIL----RISPLHATMNSPRGFGPPPKKIKKSKKPKPGNQSDKEDDDEDE 98

Query: 586 XXXXXXDSDT--VIPEIVTNRMISRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTFIP 413
                 D     VIPEIVTNRMISRMG +                 LKVGLK+DVPT++P
Sbjct: 99  DDDDDEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVP 158

Query: 412 VIVSFIFFGTALLGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWGGSRKK 245
            IVSF+FFGTAL GVSYGIVSSSWDPLR+GSLLGWNEAKKNWPVFWQSF   S K+
Sbjct: 159 FIVSFVFFGTALAGVSYGIVSSSWDPLRKGSLLGWNEAKKNWPVFWQSFRNSSDKR 214


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