BLASTX nr result
ID: Lithospermum22_contig00023187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00023187
(1065 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi... 404 e-110
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ... 387 e-105
gb|AFK47126.1| unknown [Medicago truncatula] 385 e-104
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
protein product [Vitis vinifera]
Length = 479
Score = 404 bits (1037), Expect = e-110
Identities = 188/266 (70%), Positives = 224/266 (84%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ MF+ +++ F PD+VTMVS TSACGSLG L LA+QLH+CV+ A+ D L +NS+
Sbjct: 214 AVTMFMEMRKCGFEPDEVTMVSVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTLNSL 273
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
+DMYGKCGRMDLA +VF M+E NVSSWTSMIVGYAMHG + +AL+CF CMR G+RPNH
Sbjct: 274 VDMYGKCGRMDLAYRVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNH 333
Query: 704 VTFVGVLSACVHGGLVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAREMVE 525
VTF+GVLSACVHGG VQEGKY+F MM YG++P +QHYGCM DLLGRAGL EEAR+MVE
Sbjct: 334 VTFIGVLSACVHGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVE 393
Query: 524 KMPMKANVIVWGSLMGACEKHGNVEMGELVAKHLIELEPWNDGVFVVLSNIYASNEMWDE 345
+MPMKANVIVWG LMGACEK+GNV+MGE VA+HL+ELEPWNDGVFVVLSNIYAS +W E
Sbjct: 394 RMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWRE 453
Query: 344 VERIRGIMKERKLAKIPGYSFATSTN 267
VER+RG+MKERKL K+P YS AT+ +
Sbjct: 454 VERVRGVMKERKLDKVPAYSLATNAD 479
Score = 68.9 bits (167), Expect = 2e-09
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 4/208 (1%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ +++ + R PD T+ A Q+H A R L+ +
Sbjct: 113 ALSIYIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQVHSV--AIRHGLELNEYCESGF 170
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
I +Y K G A+KVF + R + SW ++I G + G KEA+ F MR G P+
Sbjct: 171 ISVYSKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDE 230
Query: 704 VTFVGVLSACVHGG----LVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAR 537
VT V V SAC G +Q K + +E L + D+ G+ G + A
Sbjct: 231 VTMVSVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTL---NSLVDMYGKCGRMDLAY 287
Query: 536 EMVEKMPMKANVIVWGSLMGACEKHGNV 453
+ +M + NV W S++ HG +
Sbjct: 288 RVFSRMD-EPNVSSWTSMIVGYAMHGQL 314
>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 447
Score = 387 bits (993), Expect = e-105
Identities = 185/266 (69%), Positives = 217/266 (81%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
AI +FV +KR F PD +TMVS SACGS+GDL LA+QLH+ VF A+ ILM NS+
Sbjct: 182 AIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSL 241
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
IDMYGKCGRMDLA +VF ME+RNVSSWTSMIVGYAMHGH KEAL CF CMR G++PN+
Sbjct: 242 IDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNY 301
Query: 704 VTFVGVLSACVHGGLVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAREMVE 525
VTF+GVLSACVHGG VQEG+++F MMKN YGI P LQHYGCM DLLGRAGLF++AR MVE
Sbjct: 302 VTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVE 361
Query: 524 KMPMKANVIVWGSLMGACEKHGNVEMGELVAKHLIELEPWNDGVFVVLSNIYASNEMWDE 345
+MPMK N +VWG LMGACEKHGNV+M E VA++L LEPWN+GV+VVLSNIYA+ +W E
Sbjct: 362 EMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKE 421
Query: 344 VERIRGIMKERKLAKIPGYSFATSTN 267
VERIR MKE +LAKIP YS T+++
Sbjct: 422 VERIRSFMKEGRLAKIPAYSITTNSD 447
Score = 75.9 bits (185), Expect = 2e-11
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ ++V + R +PD T+ A + L Q+H + + + +
Sbjct: 81 ALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHS--YGIKLGLQSNEYCESGF 138
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
I++Y K G D A+KVF E E + SW ++I G + G +A+ F M+ G P+
Sbjct: 139 INLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDG 198
Query: 704 VTFVGVLSACVHGG----LVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAR 537
+T V V+SAC G +Q KY F NE+ ++ M + D+ G+ G + A
Sbjct: 199 ITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILM---SNSLIDMYGKCGRMDLAY 255
Query: 536 EMVEKMPMKANVIVWGSLMGACEKHGNVE 450
E+ M + NV W S++ HG+ +
Sbjct: 256 EVFATMEDR-NVSSWTSMIVGYAMHGHAK 283
>gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 385 bits (988), Expect = e-104
Identities = 184/266 (69%), Positives = 216/266 (81%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
AI +FV +KR F PD +TMVS ACGS+GDL LA+QLH+ VF A+ ILM NS+
Sbjct: 182 AIVVFVDMKRHGFEPDGITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSL 241
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
IDMYGKCGRMDLA +VF ME+RNVSSWTSMIVGYAMHGH KEAL CF CMR G++PN+
Sbjct: 242 IDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNY 301
Query: 704 VTFVGVLSACVHGGLVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAREMVE 525
VTF+GVLSACVHGG VQEG+++F MMKN YGI P LQHYGCM DLLGRAGLF++AR MVE
Sbjct: 302 VTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVE 361
Query: 524 KMPMKANVIVWGSLMGACEKHGNVEMGELVAKHLIELEPWNDGVFVVLSNIYASNEMWDE 345
+MPMK N +VWG LMGACEKHGNV+M E VA++L LEPWN+GV+VVLSNIYA+ +W E
Sbjct: 362 EMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKE 421
Query: 344 VERIRGIMKERKLAKIPGYSFATSTN 267
VERIR MKE +LAKIP YS T+++
Sbjct: 422 VERIRSFMKEGRLAKIPAYSITTNSD 447
Score = 73.9 bits (180), Expect = 6e-11
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ ++V + R +PD T+ A + L Q+H + + + +
Sbjct: 81 ALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHS--YGIKLGLQSNEYCESGF 138
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
I++Y K G D A+KVF E E + SW ++I G + G +A+ F M+ G P+
Sbjct: 139 INLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDG 198
Query: 704 VTFVGVLSACVHGG----LVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAR 537
+T V V+ AC G +Q KY F NE+ ++ M + D+ G+ G + A
Sbjct: 199 ITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILM---SNSLIDMYGKCGRMDLAY 255
Query: 536 EMVEKMPMKANVIVWGSLMGACEKHGNVE 450
E+ M + NV W S++ HG+ +
Sbjct: 256 EVFATMEDR-NVSSWTSMIVGYAMHGHAK 283
>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170-like
[Cucumis sativus]
Length = 614
Score = 374 bits (960), Expect = e-101
Identities = 174/263 (66%), Positives = 211/263 (80%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ MF+ L++ PDD T+VS TSACGSLG+L L++Q+H+ VF + G +ILM+NS+
Sbjct: 349 AVNMFIKLRQSGLEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSL 408
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
IDMYGKCGRMDLA KVF M RNVSSWTS+IVGYAMHG VK+AL+ F MR G+ PN
Sbjct: 409 IDMYGKCGRMDLAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQ 468
Query: 704 VTFVGVLSACVHGGLVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAREMVE 525
VTFVGVLSACVHGG++ EGK++F MMKN YG P L HYGCM DLL +AGL EEAR M+E
Sbjct: 469 VTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIE 528
Query: 524 KMPMKANVIVWGSLMGACEKHGNVEMGELVAKHLIELEPWNDGVFVVLSNIYASNEMWDE 345
+MPMKAN I+WG L+G CEKHGNVE+GE KHL ELEPWNDGV+VVLSNIYA+N MW E
Sbjct: 529 EMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKE 588
Query: 344 VERIRGIMKERKLAKIPGYSFAT 276
+++R +MK+R+LAK+PGYS AT
Sbjct: 589 AQKMRDVMKQRQLAKVPGYSLAT 611
Score = 78.6 bits (192), Expect = 2e-12
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ +++ + + +PD T+ A L +QLH A R D + +
Sbjct: 248 ALFVYIAMLQAGILPDCYTLPIVFKALSLAYAFDLGLQLHSV--AIRLGFEFDQYSESGL 305
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
I +Y K G ++ A KVF + R + SW ++I G + G KEA++ F +R GL P+
Sbjct: 306 ISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDD 365
Query: 704 VTFVGVLSACVHGG----LVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAR 537
T V V SAC G +Q K+ F + + ML + D+ G+ G + A
Sbjct: 366 FTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILML---NSLIDMYGKCGRMDLAM 422
Query: 536 EMVEKMPMKANVIVWGSLMGACEKHGNVE 450
++ M + NV W SL+ HG V+
Sbjct: 423 KVFSNMGHR-NVSSWTSLIVGYAMHGQVK 450
>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170-like
[Cucumis sativus]
Length = 609
Score = 374 bits (960), Expect = e-101
Identities = 174/263 (66%), Positives = 211/263 (80%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ MF+ L++ PDD T+VS TSACGSLG+L L++Q+H+ VF + G +ILM+NS+
Sbjct: 344 AVNMFIKLRQSGLEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSL 403
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
IDMYGKCGRMDLA KVF M RNVSSWTS+IVGYAMHG VK+AL+ F MR G+ PN
Sbjct: 404 IDMYGKCGRMDLAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQ 463
Query: 704 VTFVGVLSACVHGGLVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAREMVE 525
VTFVGVLSACVHGG++ EGK++F MMKN YG P L HYGCM DLL +AGL EEAR M+E
Sbjct: 464 VTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIE 523
Query: 524 KMPMKANVIVWGSLMGACEKHGNVEMGELVAKHLIELEPWNDGVFVVLSNIYASNEMWDE 345
+MPMKAN I+WG L+G CEKHGNVE+GE KHL ELEPWNDGV+VVLSNIYA+N MW E
Sbjct: 524 EMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKE 583
Query: 344 VERIRGIMKERKLAKIPGYSFAT 276
+++R +MK+R+LAK+PGYS AT
Sbjct: 584 AQKMRDVMKQRQLAKVPGYSLAT 606
Score = 79.7 bits (195), Expect = 1e-12
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Frame = -2
Query: 1064 AIGMFVGLKREAFVPDDVTMVSATSACGSLGDLILAIQLHRCVFAARRWGSLDILMMNSM 885
A+ +++ + R +PD T+ A L +QLH A R D + +
Sbjct: 243 ALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSV--AIRLGFEFDQYSESGL 300
Query: 884 IDMYGKCGRMDLANKVFWEMEERNVSSWTSMIVGYAMHGHVKEALDCFACMRGVGLRPNH 705
I +Y K G ++ A KVF + R + SW ++I G + G KEA++ F +R GL P+
Sbjct: 301 ISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDD 360
Query: 704 VTFVGVLSACVHGG----LVQEGKYFFSMMKNEYGIMPMLQHYGCMADLLGRAGLFEEAR 537
T V V SAC G +Q K+ F + + ML + D+ G+ G + A
Sbjct: 361 FTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILML---NSLIDMYGKCGRMDLAM 417
Query: 536 EMVEKMPMKANVIVWGSLMGACEKHGNVE 450
++ M + NV W SL+ HG V+
Sbjct: 418 KVFSNMGHR-NVSSWTSLIVGYAMHGQVK 445