BLASTX nr result

ID: Lithospermum22_contig00023180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023180
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   143   7e-32
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              143   7e-32
ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subu...   138   2e-30
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     135   2e-29
gb|AAP58374.1| RPA 32kDa [Pisum sativum]                              135   3e-29

>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  143 bits (361), Expect = 7e-32
 Identities = 69/121 (57%), Positives = 89/121 (73%)
 Frame = +2

Query: 35  EANQRGSSVGGCRDGQPMSPLTVKQISGEVQSDDDKSSFLVNGTRVTNVKLVGMVYNKSV 214
           +A + G S    RD Q + PLTVKQIS    S DDKS+FL++G  V NV LVGMV+NK+ 
Sbjct: 25  QAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVGMVFNKAE 84

Query: 215 RVTDASFVLDDGTGRVECTRWMNDSADTDEVEGFADEMYVRVYGHLKLYQGKKQVVAFAI 394
           RVTD  F+LDDGTGR++C RW+N++ DT E+EG  D MYVRV+GHLK +QGK+ +  F+I
Sbjct: 85  RVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSI 144

Query: 395 R 397
           R
Sbjct: 145 R 145



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = +3

Query: 882  PICDYNEIASHFLECVFMHAYNAKVXXXXXXXXXXXXXXXXXXXXXXGHQPASSTHSVEQ 1061
            P+ D+NEIASHF+EC+++H YN K                       G+Q +       Q
Sbjct: 146  PVTDFNEIASHFIECIYVHIYNTK--SRAGGPTQSHVTNPAIGTPLKGYQASQPNQFSGQ 203

Query: 1062 YSLDGLKDMEKKIIGYLEQPSSVAQEKGV 1148
            Y   GLK +++ +I YL+QP S+A+++GV
Sbjct: 204  YGA-GLKGVDQLVIDYLQQPQSLARDQGV 231


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  143 bits (361), Expect = 7e-32
 Identities = 69/121 (57%), Positives = 89/121 (73%)
 Frame = +2

Query: 35  EANQRGSSVGGCRDGQPMSPLTVKQISGEVQSDDDKSSFLVNGTRVTNVKLVGMVYNKSV 214
           +A + G S    RD Q + PLTVKQIS    S DDKS+FL++G  V NV LVGMV+NK+ 
Sbjct: 25  QAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVGMVFNKAE 84

Query: 215 RVTDASFVLDDGTGRVECTRWMNDSADTDEVEGFADEMYVRVYGHLKLYQGKKQVVAFAI 394
           RVTD  F+LDDGTGR++C RW+N++ DT E+EG  D MYVRV+GHLK +QGK+ +  F+I
Sbjct: 85  RVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSI 144

Query: 395 R 397
           R
Sbjct: 145 R 145



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = +3

Query: 882  PICDYNEIASHFLECVFMHAYNAKVXXXXXXXXXXXXXXXXXXXXXXGHQPASSTHSVEQ 1061
            P+ D+NEIASHF+EC+++H YN K                       G+Q +       Q
Sbjct: 146  PVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVTNPAIGTPLKGYQASQPNQFSGQ 205

Query: 1062 YSLDGLKDMEKKIIGYLEQPSSVAQEKGV 1148
            Y   GLK +++ +I YL+QP S+A+++GV
Sbjct: 206  YGA-GLKGVDQLVIDYLQQPQSLARDQGV 233


>ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
           sativus] gi|449500253|ref|XP_004161048.1| PREDICTED:
           replication protein A 32 kDa subunit B-like [Cucumis
           sativus]
          Length = 277

 Score =  138 bits (348), Expect = 2e-30
 Identities = 63/109 (57%), Positives = 87/109 (79%)
 Frame = +2

Query: 71  RDGQPMSPLTVKQISGEVQSDDDKSSFLVNGTRVTNVKLVGMVYNKSVRVTDASFVLDDG 250
           RD Q + PLTVKQI+    S DDKS+F+++G  V NVKLVGMV N++ R+TD +F LDDG
Sbjct: 36  RDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDG 95

Query: 251 TGRVECTRWMNDSADTDEVEGFADEMYVRVYGHLKLYQGKKQVVAFAIR 397
           TGR++C++W+N++AD++EVEG  D MYVRV+GHLK +QGK+ +  F+IR
Sbjct: 96  TGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIR 144


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  135 bits (340), Expect = 2e-29
 Identities = 61/109 (55%), Positives = 87/109 (79%)
 Frame = +2

Query: 71  RDGQPMSPLTVKQISGEVQSDDDKSSFLVNGTRVTNVKLVGMVYNKSVRVTDASFVLDDG 250
           RD Q + PLTVKQIS   QS DDK++FL++G  V NVKLVG+++NK+  +T  SFV+DDG
Sbjct: 58  RDSQTLIPLTVKQISEAFQSSDDKTNFLIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDG 117

Query: 251 TGRVECTRWMNDSADTDEVEGFADEMYVRVYGHLKLYQGKKQVVAFAIR 397
           TGR++C RW+N++ DT E+E   + +YVRV+GHLK +QGKKQ++A+++R
Sbjct: 118 TGRLDCFRWVNEAVDTKEMEALTNGIYVRVHGHLKGFQGKKQLMAYSVR 166



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 30/90 (33%), Positives = 50/90 (55%)
 Frame = +3

Query: 882  PICDYNEIASHFLECVFMHAYNAKVXXXXXXXXXXXXXXXXXXXXXXGHQPASSTHSVEQ 1061
            P+ DYNEIASHF E +++H+YN+++                          AS+++    
Sbjct: 167  PVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQVPSSSFNTPLKGYQASASNQFPG 226

Query: 1062 YSLDGLKDMEKKIIGYLEQPSSVAQEKGVH 1151
            +++DG+  + K ++ YL+QPS +A EKGVH
Sbjct: 227  FNMDGIGGVHKMVLDYLQQPSCLALEKGVH 256


>gb|AAP58374.1| RPA 32kDa [Pisum sativum]
          Length = 273

 Score =  135 bits (339), Expect = 3e-29
 Identities = 64/121 (52%), Positives = 90/121 (74%)
 Frame = +2

Query: 35  EANQRGSSVGGCRDGQPMSPLTVKQISGEVQSDDDKSSFLVNGTRVTNVKLVGMVYNKSV 214
           + N+   +    RD Q + P+TVKQIS   QS D+KS+F +NG  +TNV LVGMVY K+ 
Sbjct: 22  QLNESSPAPTKSRDSQGLVPVTVKQISEASQSGDEKSNFAINGVDLTNVTLVGMVYEKTE 81

Query: 215 RVTDASFVLDDGTGRVECTRWMNDSADTDEVEGFADEMYVRVYGHLKLYQGKKQVVAFAI 394
           R TD +FVLDDGTGR++C RW+N++ D+ E+E  +++MYVRVYG+LK +QG KQ+ AF++
Sbjct: 82  RNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDMYVRVYGNLKSFQGVKQLGAFSV 141

Query: 395 R 397
           R
Sbjct: 142 R 142


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