BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023171
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   102   3e-20
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/110 (69%), Positives = 86/110 (78%)
 Frame = +1

Query: 4   SWTCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSRC 183
           SWT L+ GYAK G+MDRACE+F  MPVRN+VSWAVMISGF+G GRY EA+ +F NML   
Sbjct: 246 SWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLC-- 303

Query: 184 KEDNVRPNEAVLVCALSACAHLGALDQGNRISGYIFDNGMSKSSNIRTAL 333
            +D V PNEAVLVC LSACAHLGALDQGN I  YI   G+ +SSNI TAL
Sbjct: 304 -DDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTAL 352



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = +1

Query: 10  TCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSRCKE 189
           T L+  YAK G +D A  +F  +  R+ +S+  MISG    G   +A+  F  ML    +
Sbjct: 350 TALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQML----D 405

Query: 190 DNVRPNEAVLVCALSACAHLGALDQGNRI 276
           +NV PNE  ++  L+ C+H G +++G+ I
Sbjct: 406 ENVMPNEITILGVLNGCSHSGLVEEGSSI 434


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/111 (56%), Positives = 79/111 (71%)
 Frame = +1

Query: 1   VSWTCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSR 180
           ++WT +V GYA +G++ RA E+F  MP RN+VSWAVM++G+VG   Y EA++ F +ML  
Sbjct: 224 ITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLC- 282

Query: 181 CKEDNVRPNEAVLVCALSACAHLGALDQGNRISGYIFDNGMSKSSNIRTAL 333
              D V+PNEAVLV  LSACAHLGALDQG  I  YI  N +  SSNI TAL
Sbjct: 283 --HDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTAL 331


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/111 (48%), Positives = 71/111 (63%)
 Frame = +1

Query: 1   VSWTCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSR 180
           VSW+ L+ G+AK GDMDRA E+F +MP +N VSW  M+ GF  +G   +A+  F  ML  
Sbjct: 282 VSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKML-- 339

Query: 181 CKEDNVRPNEAVLVCALSACAHLGALDQGNRISGYIFDNGMSKSSNIRTAL 333
             E+ VRPN   +V ALSACA +G L+ G RI  YI DNG+  +  + TAL
Sbjct: 340 --EEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTAL 388



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = +1

Query: 10  TCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSRCKE 189
           T LV  YAK G+++ A E+FG    ++  +W VMI G+   G   +AI  F  M+     
Sbjct: 386 TALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFA--- 442

Query: 190 DNVRPNEAVLVCALSACAHLGALDQG 267
             ++P+E V +  L+AC H G +D G
Sbjct: 443 -GIKPDEVVFLALLTACMHSGQVDIG 467


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/110 (46%), Positives = 73/110 (66%)
 Frame = +1

Query: 4   SWTCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSRC 183
           +W  L++GY++ GDM+ A +IF  MP RN VSW  MISG+  +GRYA+A+E F   L   
Sbjct: 150 TWNALIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGRYAKALELF---LKME 206

Query: 184 KEDNVRPNEAVLVCALSACAHLGALDQGNRISGYIFDNGMSKSSNIRTAL 333
           KE+ +RPNE  +   L ACA+LGAL+ G+RI  Y  +NG+ ++  +  AL
Sbjct: 207 KENGLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSNAL 256


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/110 (41%), Positives = 69/110 (62%)
 Frame = +1

Query: 4   SWTCLVSGYAKKGDMDRACEIFGRMPVRNEVSWAVMISGFVGSGRYAEAIEYFGNMLSRC 183
           +W  L++GYA+ G M+ A E+F +MPVRN +SW  +ISG+  +G+YA+A+E F   +   
Sbjct: 150 TWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMF---IGLE 206

Query: 184 KEDNVRPNEAVLVCALSACAHLGALDQGNRISGYIFDNGMSKSSNIRTAL 333
            E   +PNE  +   L AC+ LGALD G RI  Y  +NG  K++ +  A+
Sbjct: 207 NEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAV 256