BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023139
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   353   5e-95
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              335   2e-89
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   335   2e-89
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   317   3e-84
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   310   4e-82

>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  353 bits (906), Expect = 5e-95
 Identities = 188/360 (52%), Positives = 251/360 (69%), Gaps = 2/360 (0%)
 Frame = -2

Query: 1217 GQISGKVLVYRNPCLHFGDIHVMTAKPVEAIQDVVGNAKYGIFFSTKGIKSAAAEMGNGD 1038
            GQI+GKVLVYRNP LHFGDIHV+TAK VE +  VVGNAKY IFFS+KG +S A E+  GD
Sbjct: 702  GQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGD 761

Query: 1037 FDGDVYWVSQHPELLEKFNQCMPWTRALPTPPADEIKARKPGDFSPHGLEIELFRQLQDA 858
            FDGD+YWVS++ +LLE F  C PW    P+P  + +  +KP +FS   LE ELF+     
Sbjct: 762  FDGDMYWVSRNSQLLEYFRPCEPWR---PSPSTEVVTNKKPKEFSADELENELFKLFLST 818

Query: 857  R-NSSISMGVAADSWLAHMDWFLMLGDADVEQKKYLRQKILKLIDIYYDALDAP-KSGKK 684
            R   S +  VAAD+WLA MD FLMLG+   E++  +R KIL+LI+IYYDALDAP K GKK
Sbjct: 819  RFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKK 878

Query: 683  VTIDTFLKAKKFPHHMEKEGSFKTYVSGSILGRIYDSPELLEPEQPQIQDLLKLPCFNIE 504
            + +   LKA   PH ME+     +YVS SILG+I+D+  + + E P I ++ KLPCF  E
Sbjct: 879  IEVPKHLKAGTLPHFMER--GKNSYVSTSILGQIFDTANMYQEEVPNI-EVQKLPCFEEE 935

Query: 503  ISETSLIKWTELYEKYREEMSNAMKIPDLEARKRIPDEIIKTYRKLLYEAEDFEDSPRNS 324
            + E   +KW  LYE YR++M +AM++ D +A+    +  IK Y+++LY AE+ E SPR++
Sbjct: 936  LPEYIFMKWKFLYELYRKDMVDAMQL-DPDAKNIAAEATIKKYKEILYGAEELEGSPRSN 994

Query: 323  EDIYSEALAIYNVVYDYAKSKCDLKKCGFAWKVAGSALCKFHALKQNEKPMVILPSLLRE 144
            E++Y EALAIY V YD+A S+  ++ CGFAWKVAGSAL K +A+K +E+    LPS++RE
Sbjct: 995  EEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMRE 1053


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  335 bits (858), Expect = 2e-89
 Identities = 173/362 (47%), Positives = 243/362 (67%), Gaps = 2/362 (0%)
 Frame = -2

Query: 1223 ERGQISGKVLVYRNPCLHFGDIHVMTAKPVEAIQDVVGNAKYGIFFSTKGIKSAAAEMGN 1044
            + GQ+ G+VLVY++P LHFGDIHV+ A  VEA+++ VGNAKY IFF  KG +S A EM N
Sbjct: 572  DHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMAN 631

Query: 1043 GDFDGDVYWVSQHPELLEKFNQCMPWTRALPTPPADEIKARKPGDFSPHGLEIELFRQLQ 864
             DFDGD+YWVS++ +LL+ F    PW R   T     + +++P DFSP  LE ELF+   
Sbjct: 632  SDFDGDMYWVSRNQQLLQYFRASEPWMRKRST---RHVPSKRPTDFSPDELEHELFQLFL 688

Query: 863  DAR-NSSISMGVAADSWLAHMDWFLMLGDADVEQKKYLRQKILKLIDIYYDALDAPKSGK 687
              R  +S ++G+AAD+WL  MD  L L D   ++K+ L++K+L+L DIYYDALDAPKSG 
Sbjct: 689  TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 748

Query: 686  KVTIDTFLKAKKFPHHMEKEGSFKTYVSGSILGRIYDSPELLEPEQPQIQDLLKLPCFNI 507
            KV +   LKA+KFPH M +E S   Y S SILG+IYD+ E  +PE    +++ +LP FNI
Sbjct: 749  KVNVSKELKAEKFPHFMGRESS---YHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNI 805

Query: 506  E-ISETSLIKWTELYEKYREEMSNAMKIPDLEARKRIPDEIIKTYRKLLYEAEDFEDSPR 330
            + + +  L  W + Y++YR EM+ A++    E +     E+I  Y+++LY A +FE+SPR
Sbjct: 806  DAVPQACLRSWKDRYDQYRSEMAAALQHGG-ETKDEYAAEVINKYKQILYGAAEFEESPR 864

Query: 329  NSEDIYSEALAIYNVVYDYAKSKCDLKKCGFAWKVAGSALCKFHALKQNEKPMVILPSLL 150
            N EDI+ EALAIY+V Y++  +   +  C F W+VAG ALCK + +K  EK MV +PS+L
Sbjct: 865  NLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVL 924

Query: 149  RE 144
            R+
Sbjct: 925  RQ 926


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  335 bits (858), Expect = 2e-89
 Identities = 173/362 (47%), Positives = 243/362 (67%), Gaps = 2/362 (0%)
 Frame = -2

Query: 1223 ERGQISGKVLVYRNPCLHFGDIHVMTAKPVEAIQDVVGNAKYGIFFSTKGIKSAAAEMGN 1044
            + GQ+ G+VLVY++P LHFGDIHV+ A  VEA+++ VGNAKY IFF  KG +S A EM N
Sbjct: 586  DHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMAN 645

Query: 1043 GDFDGDVYWVSQHPELLEKFNQCMPWTRALPTPPADEIKARKPGDFSPHGLEIELFRQLQ 864
             DFDGD+YWVS++ +LL+ F    PW R   T     + +++P DFSP  LE ELF+   
Sbjct: 646  SDFDGDMYWVSRNQQLLQYFRASEPWMRKRST---RHVPSKRPTDFSPDELEHELFQLFL 702

Query: 863  DAR-NSSISMGVAADSWLAHMDWFLMLGDADVEQKKYLRQKILKLIDIYYDALDAPKSGK 687
              R  +S ++G+AAD+WL  MD  L L D   ++K+ L++K+L+L DIYYDALDAPKSG 
Sbjct: 703  TTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGM 762

Query: 686  KVTIDTFLKAKKFPHHMEKEGSFKTYVSGSILGRIYDSPELLEPEQPQIQDLLKLPCFNI 507
            KV +   LKA+KFPH M +E S   Y S SILG+IYD+ E  +PE    +++ +LP FNI
Sbjct: 763  KVNVSKELKAEKFPHFMGRESS---YHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNI 819

Query: 506  E-ISETSLIKWTELYEKYREEMSNAMKIPDLEARKRIPDEIIKTYRKLLYEAEDFEDSPR 330
            + + +  L  W + Y++YR EM+ A++    E +     E+I  Y+++LY A +FE+SPR
Sbjct: 820  DAVPQACLRSWKDRYDQYRSEMAAALQHGG-ETKDEYAAEVINKYKQILYGAAEFEESPR 878

Query: 329  NSEDIYSEALAIYNVVYDYAKSKCDLKKCGFAWKVAGSALCKFHALKQNEKPMVILPSLL 150
            N EDI+ EALAIY+V Y++  +   +  C F W+VAG ALCK + +K  EK MV +PS+L
Sbjct: 879  NLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVL 938

Query: 149  RE 144
            R+
Sbjct: 939  RQ 940


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  317 bits (813), Expect = 3e-84
 Identities = 174/364 (47%), Positives = 235/364 (64%), Gaps = 4/364 (1%)
 Frame = -2

Query: 1223 ERGQISGKVLVYRNPCLHFGDIHVMTAKPVEAIQDVVGNAKYGIFFSTKGIKSAAAEMGN 1044
            E GQISG+VLVYRNP LHFGDIH++ A  V+A+++ VGN+KY +FF  KG +S   E+  
Sbjct: 625  ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAG 684

Query: 1043 GDFDGDVYWVSQHPELLEKFNQCMPWTRALPTPPADEIKARKPGDFSPHGLEIELFRQ-L 867
            GDFDGD+Y++S++PELLE F    PW     TPP+     R P   SP  LE ELF   L
Sbjct: 685  GDFDGDMYFISRNPELLEHFKPSEPWVSL--TPPSKSNSGRAPSQLSPEELEEELFEMFL 742

Query: 866  QDARNSSISMGVAADSWLAHMDWFLMLGDADVEQKKYLRQKILKLIDIYYDALDAPKSGK 687
            +   ++S  +G+AADSWL  MD  L+LGD   E+K  +++K+LKLIDIYYDALDAPK G 
Sbjct: 743  KAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGD 802

Query: 686  KVTIDTFLKAKKFPHHMEKEGSFKTYVSGSILGRIYDSPELLEPEQP-QIQDLLKLPCFN 510
            KV +   L+   FPH+ME+E  FK   S SILG IYD  +    E+P    ++ KLPCF 
Sbjct: 803  KVYLPNELRPDIFPHYMEREKKFK---STSILGLIYDFVKSQTTEEPTPSSEISKLPCFE 859

Query: 509  IE-ISETSLIKWTELYEKYREEMSNAMKIPDLEARKRIPDEIIKTYRKLLYEAEDFEDSP 333
             E +SE  + K    Y+ YR EM+ AMK    E+     +E+I+ Y++  Y A  FEDS 
Sbjct: 860  DEPVSEFHMEKCRRWYDNYRSEMTQAMKTDKDES----ANEVIQRYKQEFYGAAGFEDSK 915

Query: 332  RNSEDIYSEALAIYNVVYDYAKSKCDLKKCGFAWKVAGSALCKFHALKQ-NEKPMVILPS 156
            ++ E++Y +AL +Y +VYDYA     + KCGF WKVAG  LC+F+ +K+  EK +V  PS
Sbjct: 916  KSLEELYPQALTLYKIVYDYA-IHAGVSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPS 974

Query: 155  LLRE 144
            +L+E
Sbjct: 975  VLKE 978


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  310 bits (795), Expect = 4e-82
 Identities = 167/363 (46%), Positives = 236/363 (65%), Gaps = 3/363 (0%)
 Frame = -2

Query: 1223 ERGQISGKVLVYRNPCLHFGDIHVMTAKPVEAIQDVVGNAKYGIFFSTKGIKSAAAEMGN 1044
            E  QI G VLVYRNP LHFGDIH M A  V+ ++  VG++KYGIFF   G +S A E+  
Sbjct: 594  ENSQIVGDVLVYRNPGLHFGDIHKMDATYVKELESYVGHSKYGIFFPRVGTRSVADEIAG 653

Query: 1043 GDFDGDVYWVSQHPELLEKFNQCMPWTRALPTPPADEIKARKPGDFSPHGLEIELFRQLQ 864
            GDFDGD YWVS HP+LL+ F +  PW     + P D    +KP +FSP  LE ELFR   
Sbjct: 654  GDFDGDTYWVSNHPQLLQYFRKGDPWIE--NSVPLDS-SVKKPSEFSPEELEEELFRLFL 710

Query: 863  DAR-NSSISMGVAADSWLAHMDWFLMLGDADVE-QKKYLRQKILKLIDIYYDALDAPKSG 690
              R   S +MG++ +SW+A MD  L L +   E +K+ +++ +LKLIDIYY+ALDAPKSG
Sbjct: 711  KTRFQPSYAMGMSENSWMALMDRLLTLNNCTNENEKERVKENMLKLIDIYYEALDAPKSG 770

Query: 689  KKVTIDTFLKAKKFPHHMEKEGSFKTYVSGSILGRIYDSPELLEPEQPQIQDLLKLPCFN 510
            +KV +   L A+ FPH+MEK+   K++ S SILG IYD  E+   E   + ++ KLPCF+
Sbjct: 771  RKVQVPNDLIAELFPHYMEKD---KSFTSTSILGLIYDEVEIW-LENDMVGEIWKLPCFD 826

Query: 509  IEISETSLIKWTELYEKYREEMSNAMKIPDLEARKRIPDEIIKTYRKLLY-EAEDFEDSP 333
            +E+  + L KW   YE+YR++M++A+ + D         E+ + Y++  Y    + E   
Sbjct: 827  VEVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCL 886

Query: 332  RNSEDIYSEALAIYNVVYDYAKSKCDLKKCGFAWKVAGSALCKFHALKQNEKPMVILPSL 153
            ++  DI++EALA+YNV Y+YA  K ++K+CGFAWK+AGSAL + + +KQNEK +   PS+
Sbjct: 887  KSIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPSV 946

Query: 152  LRE 144
            +RE
Sbjct: 947  VRE 949