BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023133
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    61   2e-07
dbj|BAF00495.1| hypothetical protein [Arabidopsis thaliana]            61   3e-07
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          58   2e-06
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               58   2e-06

>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = +2

Query: 485 HGQYSNNRSQNTYKNRPKNSNFSALSASPSTNRHDAILGQAPYHALPLSQCQICPKHNHT 664
           +GQ   NR +N Y  + +       S SPS +      G  P        CQIC K+ H+
Sbjct: 213 NGQSGGNRGRNNYTTKGRGFPQQISSGSPSDS------GTRP-------TCQICNKYGHS 259

Query: 665 AMECNQRFNHSYTS*IHS-SFAAFNIHEPSSDVWHPDSGASSHTT 796
           A +C +RF+H++ S   S +FAA  + +  S+ W  DSGA+SH T
Sbjct: 260 AYKCWKRFDHAFQSEDFSKAFAAMRVSDQKSNPWVTDSGATSHIT 304


>dbj|BAF00495.1| hypothetical protein [Arabidopsis thaliana]
          Length = 271

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +2

Query: 488 GQYSNNRSQNTYKNRPKNSNFSALSASPSTNRHDAILGQAPYHALPLSQCQICPKHNHTA 667
           GQ   NR +N Y  + +       S SPS +      G  P        CQIC K+ H+A
Sbjct: 127 GQSGGNRGRNNYTTKGRGFPQQISSGSPSDS------GTRP-------TCQICNKYGHSA 173

Query: 668 MECNQRFNHSYTS*IHS-SFAAFNIHEPSSDVWHPDSGASSHTT 796
            +C +RF+H++ S   S +FAA  + +  S+ W  DSGA+SH T
Sbjct: 174 YKCWKRFDHAFQSEDFSKAFAAMRVSDQKSNPWVTDSGATSHIT 217


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = +2

Query: 476 SNNHGQYSNNRSQNTYKNRPKNSNFSALSASPSTNRHDAILGQAPYHALPLSQCQICPKH 655
           S   G+   NR +  Y  R +  +    SASPS+       GQ P        CQIC + 
Sbjct: 243 SRGRGRSGQNRGRGGYSTRGRGFS-QHQSASPSS-------GQRPV-------CQICGRI 287

Query: 656 NHTAMECNQRFNHSYTS*IHS-SFAAFNIHEPSSDVWHPDSGASSHTT 796
            HTA++C  RF+++Y S + + +F+A  + + +   W+PDS A++H T
Sbjct: 288 GHTAIKCYNRFDNNYQSEVPTQAFSALRVSDETGKEWYPDSAATAHIT 335


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
 Frame = +2

Query: 476 SNNHGQYSNNRSQNTYKNRPKNSNFSALSASPSTNRHDAILGQAP---------YHALPL 628
           SN  G YS+  + +   +      FS  S   S +R  +ILG AP         +     
Sbjct: 243 SNRGGSYSHGITNSGSAHSRGRGTFSH-SRGSSGSRRSSILGPAPGTTTSNGNSFFNTGR 301

Query: 629 SQCQICPKHNHTAMECNQRFNHSYTS*IHSS--FAAFNIHEPSSDVWHPDSGASSHTT 796
            QCQIC +  H+A++C  R N SY   + SS   A    H PS + W  D+GA+SH T
Sbjct: 302 IQCQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHHSPSEETWLTDTGANSHVT 359