BLASTX nr result

ID: Lithospermum22_contig00023128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023128
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511350.1| nucleic acid binding protein, putative [Rici...   100   2e-19
gb|AFK39377.1| unknown [Medicago truncatula]                           96   3e-18
ref|XP_003601216.1| RNA-binding protein [Medicago truncatula] gi...    96   3e-18
ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245...    91   7e-17

>ref|XP_002511350.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550465|gb|EEF51952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 417

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +1

Query: 115 MEGSKEGDSEEHDITNTTFIWDKNSQLYYHNSSGFYHDPIAGWYYSSKDGFYYKFENGNY 294
           MEG KE + +E    N +F+WD ++QLY+H SSGFYHDP AGWY+SS+DG YYKFENG+Y
Sbjct: 1   MEGGKETELQETGGNNCSFVWDDSTQLYFHASSGFYHDPSAGWYFSSRDGLYYKFENGSY 60

Query: 295 VLLE 306
           VLLE
Sbjct: 61  VLLE 64


>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/66 (60%), Positives = 52/66 (78%)
 Frame = +1

Query: 136 DSEEHDITNTTFIWDKNSQLYYHNSSGFYHDPIAGWYYSSKDGFYYKFENGNYVLLESNY 315
           + +  + ++ TF+WD+NSQLY+H SSGFYHDP AGWYYS+KDG YYKFE+GNYV L+ N 
Sbjct: 4   EPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDCNK 63

Query: 316 VGDCEK 333
             D E+
Sbjct: 64  DDDVEE 69


>ref|XP_003601216.1| RNA-binding protein [Medicago truncatula]
           gi|355490264|gb|AES71467.1| RNA-binding protein
           [Medicago truncatula]
          Length = 560

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/66 (60%), Positives = 52/66 (78%)
 Frame = +1

Query: 136 DSEEHDITNTTFIWDKNSQLYYHNSSGFYHDPIAGWYYSSKDGFYYKFENGNYVLLESNY 315
           + +  + ++ TF+WD+NSQLY+H SSGFYHDP AGWYYS+KDG YYKFE+GNYV L+ N 
Sbjct: 4   EPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDCNK 63

Query: 316 VGDCEK 333
             D E+
Sbjct: 64  DDDVEE 69


>ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|222844482|gb|EEE82029.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
 Frame = +1

Query: 115 MEGSKEGDSEEHDITNTTFIWDKNSQLYYHNSSGFYHDPIAGWYYSSKDGFYYKFENGNY 294
           M G  E DS+E    +  F WD+ +QLY+H SSGFYHDP AGW+YSS+DG YYKFENG+Y
Sbjct: 1   MAGDTEPDSQETQRDDFAFDWDQTTQLYFHASSGFYHDPSAGWFYSSRDGLYYKFENGSY 60

Query: 295 VLLE--SNYVGDCEK 333
           VLLE       +CE+
Sbjct: 61  VLLECSDKVNNECER 75


>ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245077 [Vitis vinifera]
          Length = 421

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = +1

Query: 136 DSEEHDITNTTFIWDKNSQLYYHNSSGFYHDPIAGWYYSSKDGFYYKFENGNYVLLESNY 315
           +  ++    + F WD+ SQLY+H SSGFYHDP AGWYYSS+DG YYKFE+GNYVLL+S  
Sbjct: 3   EEPDYQYDESIFKWDEKSQLYFHPSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLDSQK 62

Query: 316 V 318
           V
Sbjct: 63  V 63


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