BLASTX nr result

ID: Lithospermum22_contig00023024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023024
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   101   6e-20
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...    94   1e-17
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...    90   2e-16
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...    86   2e-15

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/100 (53%), Positives = 66/100 (66%)
 Frame = -1

Query: 320 RTLSCGLSDSKLRKDGLPPRGKVVSGVPVTFYGXXXXXXXXXXXXXXXXXXXXSQGRTEN 141
           R+LSCGLSDS+LR+ G  P+G+ VS +P+                        SQ  TEN
Sbjct: 349 RSLSCGLSDSRLRRGGSVPQGRDVSDMPMASDHSSASTKSDAEALPLLVEASGSQESTEN 408

Query: 140 AAWVHDYSGEFGIYADNLLKHEIESDLASEARSGERHKHR 21
           AAWVHDYSGE GI+ADNLL+H+I+SDLASEARSG++ K R
Sbjct: 409 AAWVHDYSGELGIFADNLLRHDIDSDLASEARSGDQRKFR 448


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/106 (47%), Positives = 63/106 (59%)
 Frame = -1

Query: 320 RTLSCGLSDSKLRKDGLPPRGKVVSGVPVTFYGXXXXXXXXXXXXXXXXXXXXSQGRTEN 141
           R+LSCGLSDS+LRK G+    +    +P+                        SQ  T+N
Sbjct: 347 RSLSCGLSDSRLRKGGMASHDRDAPNMPLASDYSCSSTKSDAEALPLLVEASLSQESTDN 406

Query: 140 AAWVHDYSGEFGIYADNLLKHEIESDLASEARSGERHKHRLNDRGR 3
           A WVHDYSGE GIYAD+LLK++++SDLASEARSG +HK R N   R
Sbjct: 407 AGWVHDYSGELGIYADHLLKNDVDSDLASEARSGGQHKLRRNHNSR 452


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/106 (44%), Positives = 60/106 (56%)
 Frame = -1

Query: 320 RTLSCGLSDSKLRKDGLPPRGKVVSGVPVTFYGXXXXXXXXXXXXXXXXXXXXSQGRTEN 141
           R+LSCGLSDS+L+K      G+ +S +PV                        S   TEN
Sbjct: 345 RSLSCGLSDSRLKKGTFTANGRNISEMPVASERSSSCTKSDAEALPLLVEASGSHASTEN 404

Query: 140 AAWVHDYSGEFGIYADNLLKHEIESDLASEARSGERHKHRLNDRGR 3
           A W HDYSGE G++ DNL KH+++SDLASEARSG++ K R N   R
Sbjct: 405 ACWDHDYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSR 450


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
           predicted protein [Populus trichocarpa]
          Length = 1190

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/106 (48%), Positives = 61/106 (57%)
 Frame = -1

Query: 320 RTLSCGLSDSKLRKDGLPPRGKVVSGVPVTFYGXXXXXXXXXXXXXXXXXXXXSQGRTEN 141
           R+LSCGLSD+  RK      G+   G+PV                        SQ  T+N
Sbjct: 347 RSLSCGLSDT--RKGSTASHGRDFPGMPVASDRSSSSTKSDVEALPLLVEASGSQESTDN 404

Query: 140 AAWVHDYSGEFGIYADNLLKHEIESDLASEARSGERHKHRLNDRGR 3
           A WVHDYSGE GIYAD+LLK++I+SDLASEARSGE+ K   N  GR
Sbjct: 405 AGWVHDYSGELGIYADHLLKNDIDSDLASEARSGEQRKLGRNQNGR 450


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/106 (43%), Positives = 59/106 (55%)
 Frame = -1

Query: 320 RTLSCGLSDSKLRKDGLPPRGKVVSGVPVTFYGXXXXXXXXXXXXXXXXXXXXSQGRTEN 141
           R+LSCGLSDS+L+K      G+ +S +PV                        S   TEN
Sbjct: 349 RSLSCGLSDSRLKKGTFAANGRNISEMPVASERSSSCTRSDAEALPLLVEASGSHASTEN 408

Query: 140 AAWVHDYSGEFGIYADNLLKHEIESDLASEARSGERHKHRLNDRGR 3
           A W H YSGE G++ DNL KH+++SDLASEARSG++ K R N   R
Sbjct: 409 ACWDHYYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSR 454


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