BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023023
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   249   5e-64
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like...   224   2e-56
tpg|DAA40583.1| TPA: hypothetical protein ZEAMMB73_816984 [Zea m...   223   4e-56
gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun...   222   9e-56
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   222   9e-56

>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
            gi|296089141|emb|CBI38844.3| unnamed protein product
            [Vitis vinifera]
          Length = 667

 Score =  249 bits (636), Expect = 5e-64
 Identities = 126/266 (47%), Positives = 175/266 (65%), Gaps = 5/266 (1%)
 Frame = -2

Query: 832  GCTPKAIGFKCVCSSCDLGRKKKEVEKKENWHLKICRKIASEHNFPNNEIFNILMSND-- 659
            GC  K  GF C CS+CD+ RK+K  +K+ENW L++C+KIA E NFPNNEI  + +SN+  
Sbjct: 361  GCLEKPEGFVCDCSTCDMDRKEKAQKKQENWQLRVCKKIAMEQNFPNNEIIELYLSNNHG 420

Query: 658  --LDIDDKHLMSWARPKMDMLVDYLSYHLQWEPSYTRQRMFPMLSTIFLREVASSKANND 485
               + D  H+ SW  PK ++LVD+L+YH  WEPSY RQRM PMLSTIF RE A +  N  
Sbjct: 421  HFTEKDGPHI-SWESPKTEVLVDFLAYHQHWEPSYIRQRMLPMLSTIFFREKALNPTNT- 478

Query: 484  LLCGQYEFNSIQRVKIRYGHRFYLVRWSKPTPSAENALYTIHSDDEPEMQE-SGYDQSSN 308
            LL GQYEF+SIQRVK+R+GH+F++V+W K   +  +  YTI  D + E ++ +  D+S +
Sbjct: 479  LLYGQYEFDSIQRVKVRFGHQFFVVKWKKAVHAMASVAYTIPGDSDIEQEKLTEVDESID 538

Query: 307  LLDDSDVPQVQIDNGCCFLCSDEDIELVFEAYPDKVDQFLXXXXXXXXXXXXXXXXXXXX 128
            LLD+ +VPQ+ +D+GC FL +DE+++LV  A+P++V++FL                    
Sbjct: 539  LLDECNVPQIHVDDGCWFLLTDENMDLVRAAFPEEVNRFLLEKELKESKRRNKSGLRSEG 598

Query: 127  XXXXXXSPASNGVQLSITQFYSSSKV 50
                  SP S GVQLSIT+FY S+KV
Sbjct: 599  VEEMPDSPKSKGVQLSITEFYRSAKV 624


>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
            gi|449472478|ref|XP_004153607.1| PREDICTED: flap
            endonuclease GEN-like 1-like [Cucumis sativus]
            gi|449516535|ref|XP_004165302.1| PREDICTED: flap
            endonuclease GEN-like 1-like [Cucumis sativus]
          Length = 606

 Score =  224 bits (571), Expect = 2e-56
 Identities = 121/281 (43%), Positives = 170/281 (60%), Gaps = 7/281 (2%)
 Frame = -2

Query: 838  GNGCTPKAIGFKCVCSSCDLGRKKKEVEKKENWHLKICRKIASEHNFPNNEIFNILMSND 659
            G GC  K  GFKC CSSC++ R++KE +K+ENW L++  KIA E NFP++E+  +   ++
Sbjct: 305  GEGCIKKPDGFKCNCSSCNMDREEKEKKKQENWRLRVRNKIAMEPNFPSSELIQMYQCDN 364

Query: 658  LDI--DDKHLMSWARPKMDMLVDYLSYHLQWEPSYTRQRMFPMLSTIFLREVASSKANND 485
                 DD  ++SW  P+ +MLVD+L +HLQWEPSY RQRM PMLSTIFLRE+A++     
Sbjct: 365  HSYFSDDDLVLSWGSPRTEMLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMANNPTQT- 423

Query: 484  LLCGQYEFNSIQRVKIRYGHRFYLVRWSKPTPSAENALYTIHSDDEPEM-----QESGYD 320
            LL GQYEF+SI R KIRYGH FY+V+W K  P    A+ + + D   E           D
Sbjct: 424  LLYGQYEFDSILREKIRYGHSFYVVKWKKAVP----AISSTYEDSSGEFGTGPDDAIDVD 479

Query: 319  QSSNLLDDSDVPQVQIDNGCCFLCSDEDIELVFEAYPDKVDQFLXXXXXXXXXXXXXXXX 140
            ++ NL D+SD P++ I +GC FL +DE++ELV  AYP++  +FL                
Sbjct: 480  EAVNLTDESDSPKIHIQDGCSFLLTDENMELVAAAYPEQAAKFL---QEKEMKRQKTPST 536

Query: 139  XXXXXXXXXXSPASNGVQLSITQFYSSSKVNRTSVETPVNS 17
                      S  + GVQLSIT+FY ++K  +T+  T + +
Sbjct: 537  PACETSGKSDSSKAKGVQLSITEFYRATKTQQTADTTDLTN 577


>tpg|DAA40583.1| TPA: hypothetical protein ZEAMMB73_816984 [Zea mays]
          Length = 636

 Score =  223 bits (568), Expect = 4e-56
 Identities = 118/276 (42%), Positives = 166/276 (60%), Gaps = 17/276 (6%)
 Frame = -2

Query: 829  CTPKAIGFKCVCSSCDLGRKKKEVEKKENWHLKICRKIASEHNFPNNEIFNILMSNDLDI 650
            C  K  GFKC C SCD  R+ KE  + ENW +K+C++IA+E NFPN+EI  + +S++  +
Sbjct: 317  CMEKPTGFKCECPSCDEARELKEQRRHENWQIKVCKRIAAETNFPNDEIIKLYLSDNNLV 376

Query: 649  DDKH--LMSWARPKMDMLVDYLSYHLQWEPSYTRQRMFPMLSTIFLREVASSKANNDLLC 476
            ++K   L++W +P ++ LVD LSY   WEPSY RQ M PMLSTI+LREVASS +   LLC
Sbjct: 377  EEKGVPLLTWNKPDVEALVDLLSYKQNWEPSYIRQSMLPMLSTIYLREVASSPSTPLLLC 436

Query: 475  GQYEFNSIQRVKIRYGHRFYLVRW-------------SKPTPSAENALYTIHSDDEPEMQ 335
             QYEF+SIQR+KI++GH +YLV+W             +KP    E +   +  D++ ++ 
Sbjct: 437  DQYEFDSIQRIKIKHGHPYYLVKWKRATRGMNSIMSSNKPVMEGETSSEVVLLDEDDDL- 495

Query: 334  ESGYDQSSNLLDDSDVPQVQIDNGCCFLCSDEDIELVFEAYPDKVDQFL--XXXXXXXXX 161
            ++   +S  LLD+ DVPQV ID+GCCF+ +DEDI+LV  A+P +  +F            
Sbjct: 496  DAVVCESPELLDEPDVPQVLIDDGCCFVLTDEDIQLVGAAFPKETARFQEEQRLKEARSR 555

Query: 160  XXXXXXXXXXXXXXXXXSPASNGVQLSITQFYSSSK 53
                              P  +GVQLSIT+FY S K
Sbjct: 556  SRKSKSSLADSACKTPEGPRPSGVQLSITEFYRSKK 591


>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
          Length = 547

 Score =  222 bits (565), Expect = 9e-56
 Identities = 113/263 (42%), Positives = 165/263 (62%), Gaps = 3/263 (1%)
 Frame = -2

Query: 832  GCTPKAIGFKCVCSSCDLGRKKKEVEKKENWHLKICRKIASEHNFPNNEIFNILMSND-- 659
            GC  K  GFKC C+SC + RK KE +K ENWH KIC KIA E NFP +EI ++ + ND  
Sbjct: 240  GCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNG 299

Query: 658  -LDIDDKHLMSWARPKMDMLVDYLSYHLQWEPSYTRQRMFPMLSTIFLREVASSKANNDL 482
                +D   +SW RP MD+LVD+L++H  W+PSY R+ MFPM+STIFLRE+A++  ++ L
Sbjct: 300  YFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMATTPTDS-L 358

Query: 481  LCGQYEFNSIQRVKIRYGHRFYLVRWSKPTPSAENALYTIHSDDEPEMQESGYDQSSNLL 302
            L GQ+EF S++RVK RYG++FY+V+W +   +  +      S  + ++ E   D++ +LL
Sbjct: 359  LFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLL 418

Query: 301  DDSDVPQVQIDNGCCFLCSDEDIELVFEAYPDKVDQFLXXXXXXXXXXXXXXXXXXXXXX 122
            DD D PQ+  ++GC FL +DE+++LV  AYP++V +F                       
Sbjct: 419  DDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENE 478

Query: 121  XXXXSPASNGVQLSITQFYSSSK 53
                SP S GVQL+IT+F+ ++K
Sbjct: 479  KSSTSPNSKGVQLNITEFFPTTK 501


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
            gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
            class 2 [Medicago truncatula] gi|355498862|gb|AES80065.1|
            Flap endonuclease GEN-like protein [Medicago truncatula]
          Length = 612

 Score =  222 bits (565), Expect = 9e-56
 Identities = 113/263 (42%), Positives = 165/263 (62%), Gaps = 3/263 (1%)
 Frame = -2

Query: 832  GCTPKAIGFKCVCSSCDLGRKKKEVEKKENWHLKICRKIASEHNFPNNEIFNILMSND-- 659
            GC  K  GFKC C+SC + RK KE +K ENWH KIC KIA E NFP +EI ++ + ND  
Sbjct: 305  GCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNG 364

Query: 658  -LDIDDKHLMSWARPKMDMLVDYLSYHLQWEPSYTRQRMFPMLSTIFLREVASSKANNDL 482
                +D   +SW RP MD+LVD+L++H  W+PSY R+ MFPM+STIFLRE+A++  ++ L
Sbjct: 365  YFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMATTPTDS-L 423

Query: 481  LCGQYEFNSIQRVKIRYGHRFYLVRWSKPTPSAENALYTIHSDDEPEMQESGYDQSSNLL 302
            L GQ+EF S++RVK RYG++FY+V+W +   +  +      S  + ++ E   D++ +LL
Sbjct: 424  LFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLL 483

Query: 301  DDSDVPQVQIDNGCCFLCSDEDIELVFEAYPDKVDQFLXXXXXXXXXXXXXXXXXXXXXX 122
            DD D PQ+  ++GC FL +DE+++LV  AYP++V +F                       
Sbjct: 484  DDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENE 543

Query: 121  XXXXSPASNGVQLSITQFYSSSK 53
                SP S GVQL+IT+F+ ++K
Sbjct: 544  KSSTSPNSKGVQLNITEFFPTTK 566