BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00023002
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   514   e-143
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-141
ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ...   485   e-135

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  514 bits (1324), Expect = e-143
 Identities = 242/370 (65%), Positives = 303/370 (81%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            K++H+Y+KEN M+S L V NAL DM+AK GSM DA  VFS M+ KDIVSWN++IGGYSKN
Sbjct: 372  KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431

Query: 181  NQPNEALSLFLEMQDHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVAN 360
            + PNEAL+LF+EMQ +++P+ +T+ CILPACASLAAL +G+E+HG+ILRNG S DR VAN
Sbjct: 432  SLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN 491

Query: 361  ALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEP 540
            ALVDMY+KCGAL +A +LFDMI  KDLVS TVMIAGY MHG+G+EAIA FN+MR +G+EP
Sbjct: 492  ALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEP 551

Query: 541  TEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKF 720
             E SF SIL AC+HSGL++EGW FF+ M+N C I+P+ EHY C+VDLL+R G LS+AYKF
Sbjct: 552  DEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKF 611

Query: 721  TKSMPLKPDATIWGALLCGCRMHHDVKLAEQVADHLLELEPENTEYYVLLANTYEEADKW 900
             K MP++PDATIWGALLCGCR++HDVKLAE+VA+H+ ELEPENT YYVLLAN Y EA+KW
Sbjct: 612  IKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKW 671

Query: 901  QEIKQLHHKIEPRWIKNRTGCSWIEIKGKVHIFDSSGNGHPEAMKIEFLLKSVRRKMEEQ 1080
            +E+K+L  +I  R ++   GCSWIEIKGKVHIF +  + HP A KIE LLK  R +M+E+
Sbjct: 672  EEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEE 731

Query: 1081 GCSSKLKYTL 1110
            G   K++Y L
Sbjct: 732  GHFPKMRYAL 741



 Score =  157 bits (397), Expect = 5e-36
 Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 2/265 (0%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            + LH Y  +      L + N L DM++K G++  A+ VF +M  + +VSW S+I GY++ 
Sbjct: 271  RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE 330

Query: 181  NQPNEALSLFLEMQ-DHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
               + ++ LF EM+ +   PD  T+T IL ACA    L  G++VH YI  N + +D FV+
Sbjct: 331  GLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVS 390

Query: 358  NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
            NAL+DMY KCG++  A  +F  ++VKD+VS   MI GY+ +   NEA+  F +M Q   +
Sbjct: 391  NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSK 449

Query: 538  PTEASFTSILSACTHSGLVEEGWTFF-HGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAY 714
            P   +   IL AC     +E G     H ++N   +D  + +   +VD+  + G L  A 
Sbjct: 450  PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLAR 507

Query: 715  KFTKSMPLKPDATIWGALLCGCRMH 789
                 +P K D   W  ++ G  MH
Sbjct: 508  LLFDMIPEK-DLVSWTVMIAGYGMH 531



 Score =  124 bits (311), Expect = 5e-26
 Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
 Frame = +1

Query: 7   LHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKNNQ 186
           ++ Y K      SL++   + ++  +   ++ A  +F  +  +D++SWNS+I GY  N  
Sbjct: 174 MNGYAKIGNFRESLSLFKRMRELGIR--RVESARKLFDELGDRDVISWNSMISGYVSNGL 231

Query: 187 PNEALSLFLEMQD-HTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVANA 363
             + L LF +M       D  T+  ++  C++   L  GR +HGY ++     +  + N 
Sbjct: 232 SEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNC 291

Query: 364 LVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPT 543
           L+DMY K G L  A+ +F+ +  + +VS T MIAGYA  G  + ++  F++M + G+ P 
Sbjct: 292 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPD 351

Query: 544 EASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKFT 723
             + T+IL AC  +GL+E G    H    E K+   L     ++D+ ++ G + +A+   
Sbjct: 352 IFTITTILHACACTGLLENG-KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVF 410

Query: 724 KSMPLKPDATIWGALLCG 777
             M +K D   W  ++ G
Sbjct: 411 SEMQVK-DIVSWNTMIGG 427



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 48/225 (21%)
 Frame = +1

Query: 247 TVTCILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVVLFDMI 426
           T   +L  CA L ++  GR +H  I  N +  D  + + LV MYV CG L     +FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 427 RVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEA--------------SFTSI 564
             + +    +++ GYA  G   E+++ F +MR+ G+   E+              S+ S+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 565 LSACTHSGLVEEGWTFF----------------------------------HGMKNECKI 642
           +S    +GL E+G   F                                  HG   +   
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 643 DPRLEHYGCMVDLLSRTGRLSEAYKFTKSMPLKPDATIWGALLCG 777
              L    C++D+ S++G L+ A +  ++M  +     W +++ G
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG 326


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  514 bits (1323), Expect = e-143
 Identities = 240/370 (64%), Positives = 302/370 (81%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            K++H+Y++EN M+S++ VCNAL DM+AK GSM+DA  VF  M  KDI+SWN++IGGYSKN
Sbjct: 119  KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 181  NQPNEALSLFLEMQDHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVAN 360
            + PNEALSLF +M    +PDG T+ CILPACASLA+L++G+EVHG+ILRNG  +D+ VAN
Sbjct: 179  SLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238

Query: 361  ALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEP 540
            ALVDMYVKCG   +A +LFDMI  KDL++ TVMIAGY MHGFGN AI TFN+MRQAG+EP
Sbjct: 239  ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 541  TEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKF 720
             E SF SIL AC+HSGL++EGW FF+ M++EC + P+LEHY C+VDLL+R+G+L+ AYKF
Sbjct: 299  DEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 721  TKSMPLKPDATIWGALLCGCRMHHDVKLAEQVADHLLELEPENTEYYVLLANTYEEADKW 900
             KSMP++PDATIWGALL GCR+HHDVKLAE+VA+H+ ELEPENT YYVLLANTY EA+KW
Sbjct: 359  IKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418

Query: 901  QEIKQLHHKIEPRWIKNRTGCSWIEIKGKVHIFDSSGNGHPEAMKIEFLLKSVRRKMEEQ 1080
            +E+K+L  KI  R +K   GCSWIE+K KVHIF +  + HP+A KIE LLK +R KM+E+
Sbjct: 419  EEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEE 478

Query: 1081 GCSSKLKYTL 1110
            G   K +Y L
Sbjct: 479  GYFPKTRYAL 488



 Score =  143 bits (361), Expect = 8e-32
 Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 2/247 (0%)
 Frame = +1

Query: 55  CNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKNNQPNEALSLFLEM-QDHT 231
           CN L DM+AK G +  A+LVF  M  + +V+W SLI  Y++    +EA+ LF EM ++  
Sbjct: 36  CNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGV 95

Query: 232 RPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVV 411
            PD  T+T +L ACA   +L  G++VH YI  N + ++ FV NAL+DMY KCG++  A  
Sbjct: 96  SPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANS 155

Query: 412 LFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEASFTSILSACTHSGL 591
           +F  + VKD++S   MI GY+ +   NEA++ F  M    ++P   +   IL AC     
Sbjct: 156 VFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLAS 214

Query: 592 VEEGWTFF-HGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKFTKSMPLKPDATIWGAL 768
           ++ G     H ++N    D ++ +   +VD+  + G    A      +P K D   W  +
Sbjct: 215 LDRGKEVHGHILRNGFFSDQQVAN--ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVM 271

Query: 769 LCGCRMH 789
           + G  MH
Sbjct: 272 IAGYGMH 278



 Score =  101 bits (252), Expect = 3e-19
 Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
 Frame = +1

Query: 259 ILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVVLFDMIRVKD 438
           IL ACA+   ++ GR VHG  ++  +       N L+DMY KCG L  A+++FD++ V+ 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 439 LVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEASFTSILSACTHSGLVEEGWTFFH 618
           +V+ T +IA YA  G  +EAI  F++M + GV P   + T++L AC  +G +E G    H
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG-KDVH 122

Query: 619 GMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKFTKSMPLKPDATIWGALLCGCRMHHDV 798
               E  +   +     ++D+ ++ G + +A      MP+K D   W  ++ G   +   
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYSKNSLP 181

Query: 799 KLAEQV-ADHLLELEPENTEYYVLL 870
             A  +  D +LE++P+ T    +L
Sbjct: 182 NEALSLFGDMVLEMKPDGTTLACIL 206


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  508 bits (1307), Expect = e-141
 Identities = 241/370 (65%), Positives = 297/370 (80%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            K +H Y++EN +E++  V NALTDM+AK GSM+DA  VFS M+ KD++SWN++IGGY+KN
Sbjct: 474  KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533

Query: 181  NQPNEALSLFLEMQDHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVAN 360
            + PNEAL+LF EMQ  ++PDG TV CILPACASLAAL+KGRE+HGY LRNG S D++V N
Sbjct: 534  SLPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTN 593

Query: 361  ALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEP 540
            A+VDMYVKCG L +A  LFDMI  KDLVS TVMIAGY MHG+G+EAI TFN+MR  G+EP
Sbjct: 594  AVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEP 653

Query: 541  TEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKF 720
             E SF SIL AC+HSGL++EGW  F+ MK EC+I+P LEHY CMVDLL+RTG L +A+KF
Sbjct: 654  DEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKF 713

Query: 721  TKSMPLKPDATIWGALLCGCRMHHDVKLAEQVADHLLELEPENTEYYVLLANTYEEADKW 900
             K+MP+KPDATIWGALLCGCR+HHDVKLAE+VA+ + ELEPENT YYVLLAN Y EA+KW
Sbjct: 714  IKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKW 773

Query: 901  QEIKQLHHKIEPRWIKNRTGCSWIEIKGKVHIFDSSGNGHPEAMKIEFLLKSVRRKMEEQ 1080
            +E+++L  KI  R +K   GCSWIEIKGK++IF +     P+A KIE LLK +R KM+E+
Sbjct: 774  EEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEE 833

Query: 1081 GCSSKLKYTL 1110
            G S K  Y L
Sbjct: 834  GYSPKTAYAL 843



 Score =  143 bits (361), Expect = 8e-32
 Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 3/266 (1%)
 Frame = +1

Query: 1    KELHHY-VKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSK 177
            K LH Y +K   ++  +   N L DM++K G +  A+ VF  M+ K +VSW S+I GY +
Sbjct: 372  KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431

Query: 178  NNQPNEALSLFLEMQDH-TRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFV 354
                + A+ LF EM+     PD   VT IL ACA    L  G+ VH YI  N L T+ FV
Sbjct: 432  EGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFV 491

Query: 355  ANALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGV 534
            +NAL DMY KCG++  A  +F  ++ KD++S   MI GY  +   NEA+  F +M++   
Sbjct: 492  SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES- 550

Query: 535  EPTEASFTSILSACTHSGLVEEGWTFF-HGMKNECKIDPRLEHYGCMVDLLSRTGRLSEA 711
            +P   +   IL AC     +++G     + ++N    D  + +   +VD+  + G L  A
Sbjct: 551  KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTN--AVVDMYVKCGLLVLA 608

Query: 712  YKFTKSMPLKPDATIWGALLCGCRMH 789
                  +P K D   W  ++ G  MH
Sbjct: 609  RSLFDMIPNK-DLVSWTVMIAGYGMH 633



 Score =  122 bits (305), Expect = 2e-25
 Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            +++H  + + G  S   V N+L   +     ++ A  +F  +  +D++SWNS+I GY KN
Sbjct: 271  RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330

Query: 181  NQPNEALSLFLEMQDH-TRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
               +  + +F++M       D  T+  +  ACA++  L  G+ +H Y ++   + DR V 
Sbjct: 331  GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIK-AATLDREVR 389

Query: 358  --NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAG 531
              N L+DMY KCG L  A+ +F+ +  K +VS T MI GY   G  + AI  F++M+  G
Sbjct: 390  FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449

Query: 532  VEPTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEA 711
            V P   + TSIL+AC  +G ++ G    H    E  ++        + D+ ++ G + +A
Sbjct: 450  VVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDA 508

Query: 712  YKFTKSMPLKPDATIWGALLCG 777
            +     M  K D   W  ++ G
Sbjct: 509  HDVFSHMK-KKDVISWNTMIGG 529



 Score =  106 bits (265), Expect = 1e-20
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
 Frame = +1

Query: 64  LTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKNNQPNEALSLFLEMQD-HTRPD 240
           L  M+ K G +++  +VF  +    I  WN +I  YS +    E+++LF +M +   +P+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250

Query: 241 GVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVVLFD 420
             T + IL   A++A + +GR+VHG I + G ++   V N+L+  Y     +  A  LFD
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310

Query: 421 MIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEASFTSILSACTHSGLVEE 600
            +  +D++S   MI+GY  +G  +  I  F KM   GV+   A+  ++  AC + G +  
Sbjct: 311 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370

Query: 601 GWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKFTKSMPLKPDATIWGALLCG 777
           G            +D  +     ++D+ S+ G L+ A +  + M  K     W +++ G
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK-TVVSWTSMITG 428



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 39/115 (33%), Positives = 58/115 (50%)
 Frame = +1

Query: 259 ILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVVLFDMIRVKD 438
           IL  CA   ++  GR V   I  +G+  D  +   LV MYVKCG L    ++FD +    
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 439 LVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEASFTSILSACTHSGLVEEG 603
           +    +MI+ Y+  G   E+I  F +M + G++P   +F+SIL        VEEG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270


>ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 785

 Score =  488 bits (1255), Expect = e-135
 Identities = 228/370 (61%), Positives = 290/370 (78%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            +E+H+++K+N M S+L V NAL +M+AK GSM++A L+FS +  K+IVSWN++IGGYS+N
Sbjct: 380  REVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQN 439

Query: 181  NQPNEALSLFLEMQDHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVAN 360
            + PNEAL LFL+MQ   +PD VT+ C+LPACA LAAL KGRE+HG+ILR G  +D  VA 
Sbjct: 440  SLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVAC 499

Query: 361  ALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEP 540
            ALVDMYVKCG L +A  LFDMI  KD++  TVMIAGY MHGFG EAI+TF KMR AG+EP
Sbjct: 500  ALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEP 559

Query: 541  TEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKF 720
             E+SFTSIL ACTHSGL++EGW  F  MK+EC I+P+LEHY CMVDLL R+G LS AYKF
Sbjct: 560  EESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKF 619

Query: 721  TKSMPLKPDATIWGALLCGCRMHHDVKLAEQVADHLLELEPENTEYYVLLANTYEEADKW 900
             ++MP+KPDA IWGALL GCR+HHDV+LAE+VA+H+ ELEPENT YYVLLAN Y EA+KW
Sbjct: 620  IETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKW 679

Query: 901  QEIKQLHHKIEPRWIKNRTGCSWIEIKGKVHIFDSSGNGHPEAMKIEFLLKSVRRKMEEQ 1080
            +E+K++  +I    +KN  GCSWIE++GK +IF +    HP+A  I+ LL+ +  KM   
Sbjct: 680  EEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRG 739

Query: 1081 GCSSKLKYTL 1110
            G S+K+KY L
Sbjct: 740  GYSNKIKYAL 749



 Score =  145 bits (366), Expect = 2e-32
 Identities = 97/295 (32%), Positives = 153/295 (51%), Gaps = 5/295 (1%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            + LH Y  + G    +   N L DM++K G++  A  VF  M    IVSW S+I  + + 
Sbjct: 279  RALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVRE 338

Query: 181  NQPNEALSLFLEMQDH-TRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
                EA+ LF EMQ    RPD   VT ++ ACA   +L+KGREVH +I +N + ++  V+
Sbjct: 339  GLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVS 398

Query: 358  NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
            NAL++MY KCG++  A ++F  + VK++VS   MI GY+ +   NEA+  F  M Q  ++
Sbjct: 399  NALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLK 457

Query: 538  PTEASFTSILSACTHSGLVEEGWTFF-HGMKNECKIDPRLEHYGC-MVDLLSRTGRLSEA 711
            P + +   +L AC     +E+G     H ++     D    H  C +VD+  + G L  A
Sbjct: 458  PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSD---LHVACALVDMYVKCGLLVLA 514

Query: 712  YKFTKSMPLKPDATIWGALLCGCRMHHDVKLAEQVAD--HLLELEPENTEYYVLL 870
             +    +P K D  +W  ++ G  MH   K A    +   +  +EPE + +  +L
Sbjct: 515  QQLFDMIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSIL 568



 Score =  127 bits (319), Expect = 6e-27
 Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1   KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
           K +H YV + G  S  AV N+L   + K G ++ A ++F  +  +D+VSWNS+I G + N
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237

Query: 181 NQPNEALSLFLEMQD-HTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
                 L  F++M +     D  T+  +L ACA++  L  GR +H Y ++ G S      
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFN 297

Query: 358 NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
           N L+DMY KCG L  A  +F  +    +VS T +IA +   G   EAI  F++M+  G+ 
Sbjct: 298 NTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLR 357

Query: 538 PTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYK 717
           P   + TS++ AC  S  +++G    + +K    +   L     ++++ ++ G + EA  
Sbjct: 358 PDIYAVTSVVHACACSNSLDKGREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANL 416

Query: 718 FTKSMPLKPDATIWGALLCG 777
               +P+K +   W  ++ G
Sbjct: 417 IFSQLPVK-NIVSWNTMIGG 435



 Score =  115 bits (287), Expect = 3e-23
 Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
 Frame = +1

Query: 1   KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
           K +H  +  NGM     +   L  M+   G +     +F  +    I  WN L+  Y+K 
Sbjct: 77  KRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKI 136

Query: 181 NQPNEALSLFLEMQD-HTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
               E++ LF +MQ+   R D  T TC+L   A+ A + + + VHGY+L+ G  +   V 
Sbjct: 137 GNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV 196

Query: 358 NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
           N+L+  Y KCG +  A +LFD +  +D+VS   MI+G  M+GF    +  F +M   GV+
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVD 256

Query: 538 PTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEA 711
              A+  ++L AC + G +  G    H    +      +     ++D+ S+ G L+ A
Sbjct: 257 VDSATLVNVLVACANVGNLTLG-RALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGA 313



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 47/181 (25%), Positives = 77/181 (42%)
 Frame = +1

Query: 247 TVTCILPACASLAALNKGREVHGYILRNGLSTDRFVANALVDMYVKCGALAIAVVLFDMI 426
           T   +L  CA L +L  G+ VH  I  NG++ D  +   LV MYV CG L     +FD I
Sbjct: 59  TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118

Query: 427 RVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEPTEASFTSILSACTHSGLVEEGW 606
               +    ++++ YA  G   E++  F KM++ G+     +FT +L     S  V E  
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRE-C 177

Query: 607 TFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKFTKSMPLKPDATIWGALLCGCRM 786
              HG   +            ++    + G +  A      +  + D   W +++ GC M
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDR-DVVSWNSMISGCTM 236

Query: 787 H 789
           +
Sbjct: 237 N 237


>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355523812|gb|AET04266.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  485 bits (1249), Expect = e-135
 Identities = 224/370 (60%), Positives = 293/370 (79%)
 Frame = +1

Query: 1    KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
            +++H YV +NGM S+L V NAL +M+AK GS+++A LVFS +  KDIVSWN++IGGYS+N
Sbjct: 417  RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 476

Query: 181  NQPNEALSLFLEMQDHTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVAN 360
              PNEAL LFL+MQ   +PD +T+ C+LPACA LAAL+KGRE+HG+ILR G  +D  VA 
Sbjct: 477  LLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 536

Query: 361  ALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVEP 540
            ALVDMY KCG L +A +LFDMI  KDL+S TVMIAGY MHGFGNEAI+TFN+MR AG+EP
Sbjct: 537  ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 596

Query: 541  TEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYKF 720
             E+SF++IL+AC+HSGL+ EGW FF+ M+NEC ++P+LEHY C+VDLL+R G LS+AYKF
Sbjct: 597  DESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF 656

Query: 721  TKSMPLKPDATIWGALLCGCRMHHDVKLAEQVADHLLELEPENTEYYVLLANTYEEADKW 900
             +SMP+KPD TIWG LL GCR+HHDVKLAE+VA+H+ ELEP+NT YYV+LAN Y EA+KW
Sbjct: 657  IESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKW 716

Query: 901  QEIKQLHHKIEPRWIKNRTGCSWIEIKGKVHIFDSSGNGHPEAMKIEFLLKSVRRKMEEQ 1080
            +E+K+L  +++ R  K   GCSWIE+ GK +IF +  + HP+A KI+ LL  +  +M+ +
Sbjct: 717  EEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNE 776

Query: 1081 GCSSKLKYTL 1110
              SS  +Y L
Sbjct: 777  DYSSMFRYVL 786



 Score =  129 bits (324), Expect = 1e-27
 Identities = 80/260 (30%), Positives = 134/260 (51%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1   KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
           K +H YV + G  S+ AV N+L   + K+G ++ A  +F  +   D+VSWNS+I G   N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274

Query: 181 NQPNEALSLFLEMQD-HTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
                 L +F++M       D  T+  +L ACA++  L+ GR +HG+ ++   S +   +
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334

Query: 358 NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
           N L+DMY KCG L  A  +F  +    +VS T +IA Y   G  ++AI  F++M+  GV 
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394

Query: 538 PTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEAYK 717
           P   + TSI+ AC  S  +++G    H    +  +   L     ++++ ++ G + EA  
Sbjct: 395 PDIYTVTSIVHACACSSSLDKG-RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 453

Query: 718 FTKSMPLKPDATIWGALLCG 777
               +P+K D   W  ++ G
Sbjct: 454 VFSKIPVK-DIVSWNTMIGG 472



 Score =  104 bits (259), Expect = 5e-20
 Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 1/238 (0%)
 Frame = +1

Query: 1   KELHHYVKENGMESSLAVCNALTDMFAKYGSMQDALLVFSSMEAKDIVSWNSLIGGYSKN 180
           K +H  +  NG+    A+   L  M+   G +     +F  +    +  WN L+  Y+K 
Sbjct: 114 KRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKI 173

Query: 181 NQPNEALSLFLEMQD-HTRPDGVTVTCILPACASLAALNKGREVHGYILRNGLSTDRFVA 357
               E++SLF +MQ      +  T TC+L   A+L  + + + VHGY+L+ G  ++  V 
Sbjct: 174 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 233

Query: 358 NALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIATFNKMRQAGVE 537
           N+L+  Y K G +  A  LFD +   D+VS   MI G  ++GF    +  F +M   GVE
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293

Query: 538 PTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLSRTGRLSEA 711
               +  S+L AC + G +  G    HG   +      +     ++D+ S+ G L+ A
Sbjct: 294 VDLTTLVSVLVACANIGNLSLG-RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGA 350



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
 Frame = +1

Query: 151 NSLIGGYSKNNQPNEALSLFLEMQDHTRPDGVTVTC-ILPACASLAALNKGREVHGYILR 327
           N+ I  + +      A+ L  + + +    G+   C +L  CA   +L  G+ VH  I+ 
Sbjct: 65  NAKINKFCEMGDLRNAIELLTKSKSYEL--GLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 122

Query: 328 NGLSTDRFVANALVDMYVKCGALAIAVVLFDMIRVKDLVSCTVMIAGYAMHGFGNEAIAT 507
           NG+S D  +   LV MYV CG L     +FD I    +    ++++ YA  G   E+++ 
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182

Query: 508 FNKMRQAGVEPTEASFTSILSACTHSGLVEEGWTFFHGMKNECKIDPRLEHYGCMVDLLS 687
           F KM++ GV     +FT +L      G V+E     HG   +            ++    
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKE-CKRVHGYVLKLGFGSNTAVVNSLIAAYF 241

Query: 688 RTGRLSEAYKFTKSMPLKPDATIWGALLCGC 780
           + G +  A+     +  +PD   W +++ GC
Sbjct: 242 KFGGVESAHNLFDELS-EPDVVSWNSMINGC 271