BLASTX nr result
ID: Lithospermum22_contig00022959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00022959
(442 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 191 5e-47
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat... 178 5e-43
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat... 178 5e-43
ref|NP_187494.1| pentatricopeptide repeat-containing protein [Ar... 175 4e-42
ref|XP_002884698.1| pentatricopeptide repeat-containing protein ... 173 1e-41
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 191 bits (485), Expect = 5e-47
Identities = 93/147 (63%), Positives = 121/147 (82%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
+E I +F++ ++ L PDS+T+VRVLSAC++ GDL++GEWIH+ ++ +G+ +NVFV TS
Sbjct: 195 REAIDMFRR-LLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTS 253
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
LV+MYAK G+MEKARSVFD MPEKDIV W AMIQGYA NG PKEA+++F MQREN+ D
Sbjct: 254 LVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPD 313
Query: 81 RYTIVGVLSACASLGALDVGEWAVGLM 1
YT+VGVLSACA LGAL++GEW GL+
Sbjct: 314 CYTVVGVLSACARLGALELGEWVSGLV 340
Score = 114 bits (284), Expect = 1e-23
Identities = 59/125 (47%), Positives = 81/125 (64%)
Frame = -2
Query: 390 PDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDMEKARSV 211
P+++T VL AC++ DL G IH +V G +VFV TSLV +YAK G +E A V
Sbjct: 110 PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKV 169
Query: 210 FDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACASLGAL 31
FD++P+K++V W+A+I GY G +EA++MF + NL D +TIV VLSAC LG L
Sbjct: 170 FDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDL 229
Query: 30 DVGEW 16
+ GEW
Sbjct: 230 NSGEW 234
Score = 93.2 bits (230), Expect = 2e-17
Identities = 52/140 (37%), Positives = 80/140 (57%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
KE I +F + + ++PD YT+V VLSAC++ G L GEW+ + N + T+
Sbjct: 296 KEAIDLFLQ-MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTA 354
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
L+++YAK G M +A VF M EKD V W+A+I G A NG+ K + +F +++ + D
Sbjct: 355 LIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPD 414
Query: 81 RYTIVGVLSACASLGALDVG 22
T +G+L C G +D G
Sbjct: 415 GNTFIGLLCGCTHAGLVDEG 434
>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 178 bits (451), Expect = 5e-43
Identities = 86/147 (58%), Positives = 116/147 (78%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
+E I FKK + G L+PDS++LV+VL+AC++ GD ++GEWI +Y+ G+G+NVFV+TS
Sbjct: 197 REAIGAFKKLLEMG-LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS 255
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
L++MY K G++E+A +F MPEKDIV WS MIQGYA NG P++AL++F+ MQ ENL D
Sbjct: 256 LLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPD 315
Query: 81 RYTIVGVLSACASLGALDVGEWAVGLM 1
YT+VGVLSACA+LGALD+G WA LM
Sbjct: 316 CYTMVGVLSACATLGALDLGIWASSLM 342
Score = 105 bits (262), Expect = 4e-21
Identities = 52/129 (40%), Positives = 81/129 (62%)
Frame = -2
Query: 402 GELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDMEK 223
G P+++T+ VL AC++ D+ G IH LV G +VFV TSL+++Y K + +
Sbjct: 108 GGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDD 167
Query: 222 ARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACAS 43
A VFD++P+K++V W+A+I GY ++GH +EA+ F + L D +++V VL+ACA
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227
Query: 42 LGALDVGEW 16
LG GEW
Sbjct: 228 LGDCTSGEW 236
Score = 89.4 bits (220), Expect = 3e-16
Identities = 45/128 (35%), Positives = 70/128 (54%)
Frame = -2
Query: 405 SGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDME 226
S L+PD YT+V VLSAC+ G L G W + N + T+L++MY+K G +
Sbjct: 309 SENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVT 368
Query: 225 KARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACA 46
+A +F M +KD V W+AM+ G + NGH K +F +++ + D T +G+L C
Sbjct: 369 QAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCT 428
Query: 45 SLGALDVG 22
G ++ G
Sbjct: 429 HGGFVNEG 436
>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 178 bits (451), Expect = 5e-43
Identities = 86/147 (58%), Positives = 116/147 (78%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
+E I FKK + G L+PDS++LV+VL+AC++ GD ++GEWI +Y+ G+G+NVFV+TS
Sbjct: 197 REAIGAFKKLLEMG-LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS 255
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
L++MY K G++E+A +F MPEKDIV WS MIQGYA NG P++AL++F+ MQ ENL D
Sbjct: 256 LLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPD 315
Query: 81 RYTIVGVLSACASLGALDVGEWAVGLM 1
YT+VGVLSACA+LGALD+G WA LM
Sbjct: 316 CYTMVGVLSACATLGALDLGIWASSLM 342
Score = 105 bits (262), Expect = 4e-21
Identities = 52/129 (40%), Positives = 81/129 (62%)
Frame = -2
Query: 402 GELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDMEK 223
G P+++T+ VL AC++ D+ G IH LV G +VFV TSL+++Y K + +
Sbjct: 108 GGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDD 167
Query: 222 ARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACAS 43
A VFD++P+K++V W+A+I GY ++GH +EA+ F + L D +++V VL+ACA
Sbjct: 168 ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACAR 227
Query: 42 LGALDVGEW 16
LG GEW
Sbjct: 228 LGDCTSGEW 236
Score = 89.0 bits (219), Expect = 4e-16
Identities = 45/128 (35%), Positives = 69/128 (53%)
Frame = -2
Query: 405 SGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDME 226
S L+PD YT+V VLSAC+ G L G W + N + T+L++MY+K G +
Sbjct: 309 SENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVT 368
Query: 225 KARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACA 46
+A +F M KD V W+AM+ G + NGH K +F +++ + D T +G+L C
Sbjct: 369 QAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCT 428
Query: 45 SLGALDVG 22
G ++ G
Sbjct: 429 HGGFVNEG 436
>ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g08820 gi|6403507|gb|AAF07847.1|AC010871_23
unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein;
90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 175 bits (443), Expect = 4e-42
Identities = 87/147 (59%), Positives = 112/147 (76%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
+E I +FKK + G ++PDSY +V+VLSAC GDL +GEWI +Y+ + + KN FV T+
Sbjct: 194 REAIDLFKKMVEMG-VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
LVN+YAK G MEKARSVFD M EKDIV WS MIQGYA+N PKE +E+F M +ENL D
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 81 RYTIVGVLSACASLGALDVGEWAVGLM 1
+++IVG LS+CASLGALD+GEW + L+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLI 339
Score = 96.7 bits (239), Expect = 2e-18
Identities = 47/127 (37%), Positives = 73/127 (57%)
Frame = -2
Query: 381 YTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDMEKARSVFDE 202
+T VL AC+++ G +H +V G +V TSL+++Y+ G + A +FDE
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 201 MPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACASLGALDVG 22
+P++ +V W+A+ GY +G +EA+++F M + D Y IV VLSAC +G LD G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 21 EWAVGLM 1
EW V M
Sbjct: 232 EWIVKYM 238
Score = 90.9 bits (224), Expect = 1e-16
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEW------IHQYLVYVGLGKN 280
KEGI +F + ++ L+PD +++V LS+C+ G L GEW H++L N
Sbjct: 295 KEGIELFLQ-MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT------N 347
Query: 279 VFVSTSLVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQR 100
+F++ +L++MYAK G M + VF EM EKDIV +A I G A NGH K + +F Q
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF--GQT 405
Query: 99 ENLGI--DRYTIVGVLSACASLGALDVG 22
E LGI D T +G+L C G + G
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDG 433
>ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330538|gb|EFH60957.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 685
Score = 173 bits (439), Expect = 1e-41
Identities = 87/147 (59%), Positives = 111/147 (75%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTS 262
+E I +FKK + G +RPDSY +V+VLSAC GDL +GEWI +++ + + KN FV T+
Sbjct: 194 REAIDLFKKMVEMG-VRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTT 252
Query: 261 LVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGID 82
LVN+YAK G MEKARSVFD M EKDIV WS MIQGYA+N PKE +E F M +ENL D
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPD 312
Query: 81 RYTIVGVLSACASLGALDVGEWAVGLM 1
+++IVG LS+CASLGALD+GEW + L+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLI 339
Score = 95.5 bits (236), Expect = 4e-18
Identities = 47/124 (37%), Positives = 72/124 (58%)
Frame = -2
Query: 381 YTLVRVLSACSKSGDLSAGEWIHQYLVYVGLGKNVFVSTSLVNMYAKFGDMEKARSVFDE 202
+T VL AC+++ + G +H +V G +V TSL+++Y+ G + A VF+E
Sbjct: 112 FTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEE 171
Query: 201 MPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQRENLGIDRYTIVGVLSACASLGALDVG 22
+PE+ +V W+A+ GY G +EA+++F M + D Y IV VLSAC +G LD G
Sbjct: 172 IPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSG 231
Query: 21 EWAV 10
EW V
Sbjct: 232 EWIV 235
Score = 90.1 bits (222), Expect = 2e-16
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Frame = -2
Query: 441 KEGIVVFKKAIVSGELRPDSYTLVRVLSACSKSGDLSAGEW------IHQYLVYVGLGKN 280
KEGI F + ++ L+PD +++V LS+C+ G L GEW H++L N
Sbjct: 295 KEGIEFFLQ-MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT------N 347
Query: 279 VFVSTSLVNMYAKFGDMEKARSVFDEMPEKDIVPWSAMIQGYAANGHPKEALEMFYCMQR 100
+F++ +L++MYAK G M + VF EM EKDIV +A I G A NGH K + +F Q
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF--GQT 405
Query: 99 ENLGI--DRYTIVGVLSACASLGALDVG 22
E LGI D T +G+L C G + G
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDG 433