BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022875
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         290   2e-76
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   290   3e-76
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              290   3e-76
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   286   3e-75
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   283   4e-74

>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  290 bits (743), Expect = 2e-76
 Identities = 150/248 (60%), Positives = 180/248 (72%), Gaps = 6/248 (2%)
 Frame = +3

Query: 3   KHTCLKLQVQNSTAPNCPEPVFVKGTWYPTRFDLLITNAQDSWTCHATEEEVEERAAQWD 182
           +HTCLKL++        PEP+F+KGTW+P  F+L IT+  +SW C+ATEEEV  RAAQWD
Sbjct: 7   RHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWD 58

Query: 183 RKVSEYVDLAEKYLGFQQPGSVYGFADAGNGNRRLSWTFEKEGTKLEWRWKCQPSPNSKK 362
           + VS Y+ LAEK+LGFQ PGSVY F DAG GN+RLSWTFEKEGTKLEWRWKCQPSP++KK
Sbjct: 59  QPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKK 118

Query: 363 TTADILDFLLDANIRLSEEVVNKTQSFDRLKVEAEKCFAQXXXXXXXXXXXXXXIFAKFV 542
           TT  ILDFL+DANIRLSEEVV KTQSF+RLK EAEKC AQ              ++AKF+
Sbjct: 119 TTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFL 178

Query: 543 AVLNSKKAKLRELRDKLSRQGTGKKIAXXXXXXXQSSDKTVSYD------ESDEELPKKH 704
            VLNSKK KLRELRD+LS+    K+I+       + SDKT S+D      +S E+  +K 
Sbjct: 179 GVLNSKKRKLRELRDQLSK----KEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKL 234

Query: 705 AGTSKDVP 728
           AGTSKD P
Sbjct: 235 AGTSKDPP 242


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  290 bits (742), Expect = 3e-76
 Identities = 146/250 (58%), Positives = 185/250 (74%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3   KHTCLKLQVQNSTAPNCPEPVFVKGTWYPTRFDLLITNAQDSWTCHATEEEVEERAAQWD 182
           +H+CLKLQ+     PN  EP+F+K TW+P+ F L IT+   +W C+A+E+EV ERAAQWD
Sbjct: 6   RHSCLKLQI-----PNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 183 RKVSEYVDLAEKYLGFQQPGSVYGFADAGNGNRRLSWTFEKEGTKLEWRWKCQPSPNSKK 362
           + VS+Y+ LAE++LGFQQPGSVYGF+DAG+G+RRLSWTFEKEGTKLEWRWKC  SP+S+ 
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 363 TTADILDFLLDANIRLSEEVVNKTQSFDRLKVEAEKCFAQXXXXXXXXXXXXXXIFAKFV 542
           TTA +LDFL++ANIRLSEEVV KTQSF+RLKVEAEKC AQ              I+AKF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 543 AVLNSKKAKLRELRDKLSRQGTGKKIAXXXXXXXQSSDKTVSYDES------DEELPKKH 704
            VLNSKKAKLRELRD++S++ T  K+        +S+DKT+S+D+       +EE  K  
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKL---PQEEDESTDKTLSFDDESDNEAIEEESSKNL 237

Query: 705 AGTSKDVPVS 734
            GTSK V  S
Sbjct: 238 TGTSKHVSTS 247


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  290 bits (742), Expect = 3e-76
 Identities = 146/250 (58%), Positives = 185/250 (74%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3   KHTCLKLQVQNSTAPNCPEPVFVKGTWYPTRFDLLITNAQDSWTCHATEEEVEERAAQWD 182
           +H+CLKLQ+     PN  EP+F+K TW+P+ F L IT+   +W C+A+E+EV ERAAQWD
Sbjct: 6   RHSCLKLQI-----PNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 183 RKVSEYVDLAEKYLGFQQPGSVYGFADAGNGNRRLSWTFEKEGTKLEWRWKCQPSPNSKK 362
           + VS+Y+ LAE++LGFQQPGSVYGF+DAG+G+RRLSWTFEKEGTKLEWRWKC  SP+S+ 
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120

Query: 363 TTADILDFLLDANIRLSEEVVNKTQSFDRLKVEAEKCFAQXXXXXXXXXXXXXXIFAKFV 542
           TTA +LDFL++ANIRLSEEVV KTQSF+RLKVEAEKC AQ              I+AKF+
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFL 180

Query: 543 AVLNSKKAKLRELRDKLSRQGTGKKIAXXXXXXXQSSDKTVSYDES------DEELPKKH 704
            VLNSKKAKLRELRD++S++ T  K+        +S+DKT+S+D+       +EE  K  
Sbjct: 181 GVLNSKKAKLRELRDQISKEETTGKL---PQEEDESTDKTLSFDDESDNEAIEEESSKNL 237

Query: 705 AGTSKDVPVS 734
            GTSK V  S
Sbjct: 238 TGTSKHVSTS 247


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  286 bits (733), Expect = 3e-75
 Identities = 145/251 (57%), Positives = 183/251 (72%), Gaps = 7/251 (2%)
 Frame = +3

Query: 3   KHTCLKLQVQNSTAPNCPEPVFVKGTWYPTRFDLLITNAQDSWTCHATEEEVEERAAQWD 182
           +HTCLKL++         EP+FVKGTW+ + F L IT+  ++W C+ATE +V+ERAAQWD
Sbjct: 14  RHTCLKLEIT--------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWD 65

Query: 183 RKVSEYVDLAEKYLGFQQPGSVYGFADAGNGNRRLSWTFEKEGTKLEWRWKCQPSPNSKK 362
           + VSEY++LAE YLGFQQPGS+Y FADAG+ ++RLSWTFEKEGTKLEWRWKCQPSP++K 
Sbjct: 66  QPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKM 125

Query: 363 TTADILDFLLDANIRLSEEVVNKTQSFDRLKVEAEKCFAQXXXXXXXXXXXXXXIFAKFV 542
           TTA ILDFL+DANIRLSEEVV KT SF+RLK EA+KC  Q              I+AKF+
Sbjct: 126 TTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFL 185

Query: 543 AVLNSKKAKLRELRDKLSRQGTGKKIAXXXXXXXQSSDKTVSY-------DESDEELPKK 701
           AVLNSKK KLR+LRD+LS++    K+        +S+DKT S+       D+S+EE P+K
Sbjct: 186 AVLNSKKRKLRQLRDQLSKKEASGKL--PQEEEEESTDKTESFEEDSSDGDKSEEEPPEK 243

Query: 702 HAGTSKDVPVS 734
             GTS+D P S
Sbjct: 244 VTGTSEDKPSS 254


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  283 bits (724), Expect = 4e-74
 Identities = 142/230 (61%), Positives = 172/230 (74%), Gaps = 1/230 (0%)
 Frame = +3

Query: 3   KHTCLKLQVQNSTAPNCPEPVFVKGTWYPTRFDLLITNAQDSWTCHATEEEVEERAAQWD 182
           +HTCLKL++        PEP+F+KGTW+P  F+L IT+  +SW C+ATEEEV +RAAQWD
Sbjct: 7   RHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQWD 58

Query: 183 RKVSEYVDLAEKYLGFQQPGSVYGFADAGNGNRRLSWTFEKEGTKLEWRWKCQPSPNSKK 362
           + VS Y+ LAEK+LGFQ PGSVY F DAG GN+RLSWTFEKEGTKLEWRWKCQPSP++KK
Sbjct: 59  QPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKK 118

Query: 363 TTADILDFLLDANIRLSEEVVNKTQSFDRLKVEAEKCFAQXXXXXXXXXXXXXXIFAKFV 542
           TT  ILDFL+DANIRLSEEVV KTQSF++LK EAEKC AQ              ++AKF+
Sbjct: 119 TTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFL 178

Query: 543 AVLNSKKAKLRELRDKLSRQGTGKKIAXXXXXXXQSSDKTVSYDE-SDEE 689
            VLNSKK KLRELRD+LS+    K+I+       + SDKT S+D  SD+E
Sbjct: 179 GVLNSKKRKLRELRDQLSK----KEISGESAQEEEDSDKTESFDRGSDDE 224