BLASTX nr result

ID: Lithospermum22_contig00022844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022844
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM89774.1| beta-tubulin 14 [Gossypium hirsutum]                   137   1e-30
ref|XP_002299042.1| tubulin, beta chain [Populus trichocarpa] gi...   137   1e-30
gb|ABY86660.1| beta-tubulin 14 [Gossypium hirsutum]                   137   1e-30
sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltNa...   136   2e-30
ref|XP_002330612.1| tubulin, beta chain [Populus trichocarpa] gi...   136   2e-30

>gb|ACM89774.1| beta-tubulin 14 [Gossypium hirsutum]
          Length = 445

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 129 MREILHIQGGQCGNQIGSKFWEVICDEHGIDQTGRYNGDSDLQLERINIYYNEANGGRYV 308
           MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YNGDSDLQLERIN+YYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDNTGKYNGDSDLQLERINVYYNEASGGRYV 60

Query: 309 PRAVLM 326
           PRAVLM
Sbjct: 61  PRAVLM 66


>ref|XP_002299042.1| tubulin, beta chain [Populus trichocarpa]
           gi|222846300|gb|EEE83847.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 445

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/66 (92%), Positives = 66/66 (100%)
 Frame = +3

Query: 129 MREILHIQGGQCGNQIGSKFWEVICDEHGIDQTGRYNGDSDLQLERINIYYNEANGGRYV 308
           MREILHIQGGQCGNQIG+KFWEVICDEHGIDQTG+Y+GDSDLQLERIN+YYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 309 PRAVLM 326
           PRAVLM
Sbjct: 61  PRAVLM 66


>gb|ABY86660.1| beta-tubulin 14 [Gossypium hirsutum]
          Length = 445

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 129 MREILHIQGGQCGNQIGSKFWEVICDEHGIDQTGRYNGDSDLQLERINIYYNEANGGRYV 308
           MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YNGDSDLQLERIN+YYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDNTGKYNGDSDLQLERINVYYNEASGGRYV 60

Query: 309 PRAVLM 326
           PRAVLM
Sbjct: 61  PRAVLM 66


>sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
           gi|37529494|gb|AAQ92665.1| beta-tubulin 5 [Gossypium
           hirsutum]
          Length = 445

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/66 (90%), Positives = 65/66 (98%)
 Frame = +3

Query: 129 MREILHIQGGQCGNQIGSKFWEVICDEHGIDQTGRYNGDSDLQLERINIYYNEANGGRYV 308
           MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG+YNGDSDLQLERIN+YYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGDSDLQLERINVYYNEASGGRYV 60

Query: 309 PRAVLM 326
           PRAVLM
Sbjct: 61  PRAVLM 66


>ref|XP_002330612.1| tubulin, beta chain [Populus trichocarpa]
           gi|222872170|gb|EEF09301.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 445

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/66 (92%), Positives = 66/66 (100%)
 Frame = +3

Query: 129 MREILHIQGGQCGNQIGSKFWEVICDEHGIDQTGRYNGDSDLQLERINIYYNEANGGRYV 308
           MREILHIQGGQCGNQIG+KFWEVICDEHGIDQ+GRY+GDSDLQLERIN+YYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQSGRYSGDSDLQLERINVYYNEASGGRYV 60

Query: 309 PRAVLM 326
           PRAVLM
Sbjct: 61  PRAVLM 66


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