BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022838
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   310   6e-82
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   286   1e-74
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp...   277   5e-72
ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   255   2e-65

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  310 bits (793), Expect = 6e-82
 Identities = 172/377 (45%), Positives = 228/377 (60%), Gaps = 34/377 (9%)
 Frame = +2

Query: 227  IKAPTAPWMKGPLLVQENQ-RPTTKRDPKFLQ----FERTGKALFGKQGCGRGKKEMNKV 391
            IK PTAPWMKGPLL+Q N+    +K  PK +      E+  ++L  K   GRG K M K+
Sbjct: 73   IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132

Query: 392  YQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSKKMPWVKDDKLVI 571
             Q   KLQ TH S  TQ    E +F  S +G+ GD  +++        KMPW+K +K+V 
Sbjct: 133  MQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRI------GGKMPWLKTEKVVF 186

Query: 572  KRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELA 751
            +R KKE+++++AEL  D  LL+RL                 V +SV+DQ+  +W+ +ELA
Sbjct: 187  RRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELA 246

Query: 752  MLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHS--------------G 889
            M+KFD+PLCRNM+RAREI EIKT G V+W  KD L VY+G NY S              G
Sbjct: 247  MVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAG 306

Query: 890  LNSHSSMI--SNIQDTESQHEVNCHDQSQDEMLGKT--ENDGS-----------NLLISG 1024
             ++ +S +  SN +D  +  E+  H+ +  E +G+   E D S           +  ++G
Sbjct: 307  ADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNG 366

Query: 1025 TLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDE 1204
            +LY+READRLLDGLGPRFIDWW  KPLPVDADLL EV+PGF+PP+R+  P  R KLTDDE
Sbjct: 367  SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDE 426

Query: 1205 LTHFRMLARPLPTHFVL 1255
            LT+ R LA  LPTHFVL
Sbjct: 427  LTYLRKLAYALPTHFVL 443


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  286 bits (731), Expect = 1e-74
 Identities = 175/414 (42%), Positives = 230/414 (55%), Gaps = 22/414 (5%)
 Frame = +2

Query: 80   AAKHIQFLMY-AATLSLHPLVKSVRIQKSFITWRPLKATNEES--------TEQDASFIK 232
            +A  +QF  Y     SL+P      +  +     P  ATN+ +          Q  + IK
Sbjct: 3    SALFLQFFSYNPIASSLNPATNKSSLNNA---QNPKFATNKNTEFTLLSVPNSQSNAPIK 59

Query: 233  APTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKKEMNKVYQ 397
             PTAPWMKGPLL+Q ++     +P  K        E++ K L GK+   RGKK M K+ +
Sbjct: 60   VPTAPWMKGPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVK 119

Query: 398  GFEKLQRTHNSVHTQTPPLEI-KFKFSSQGLFGDTQNKLDKI------GIDSKKMPWVKD 556
              E+LQ       TQ       K +  S+    +   KL  I      G++ K  PW ++
Sbjct: 120  SIEQLQENQALEKTQCDSQAYEKTQLDSEAF--EIGEKLGLIREHGDFGVNKKLKPWERE 177

Query: 557  DKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWR 736
            +K V  R+KKE+ ++ AEL  +  LL+ L                 V QSV+DQ+R+ WR
Sbjct: 178  EKFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQSVVDQIRYAWR 237

Query: 737  DNELAMLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHSGLNSH-SSMI 913
            +NELAM+KFDLPLCRNM+RAREI E+KTGG VVW  KD+L +Y+GCNYH   +SH S+M 
Sbjct: 238  NNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNYHLTKSSHVSTMD 297

Query: 914  SNIQDTESQHEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWG 1093
              I   + + E           +G   +D +   I+G+L++RE DRLLDGLGPRF+DWW 
Sbjct: 298  EKIGSKDGEEEY----IPTSIFIG---DDANTPTINGSLFERETDRLLDGLGPRFVDWWM 350

Query: 1094 RKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVL 1255
            RKPLPVDADLL EVV GF PP R      R KL DDELT+ R LA  LPTHFVL
Sbjct: 351  RKPLPVDADLLPEVVAGFMPPSRFHY--ARAKLKDDELTYLRKLAYALPTHFVL 402


>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 712

 Score =  277 bits (708), Expect = 5e-72
 Identities = 168/366 (45%), Positives = 212/366 (57%), Gaps = 12/366 (3%)
 Frame = +2

Query: 194  NEESTEQDASFIKAPTAPWMKGPLLVQENQRPTTKRDPKFLQF-----ERTGKALFGKQG 358
            N + T      IK+PT PWMK PLL+Q ++      +PK  +F     E + KAL GK+ 
Sbjct: 33   NHQHTSPSQVPIKSPTPPWMKVPLLLQPHELVDLS-NPKSKKFKPEKHELSDKALMGKEV 91

Query: 359  CGRGKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSK- 535
              RGK+ M K+    EKL +T NS  T+   L +      +   G  +   +   + SK 
Sbjct: 92   --RGKRAMKKIVDRVEKLHKTQNSNETRVDSLNV------ENFGGYLEILKENEEVRSKG 143

Query: 536  KMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVID 715
            +MPW KD+K    +VK+E+ +++AEL  D  LL RL                 V Q V+D
Sbjct: 144  RMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVD 203

Query: 716  QVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHSG-- 889
            Q++  WR NELAM+KFD+PLCRNM+RAREI E KTGG VV   KD L VY+GCN+HS   
Sbjct: 204  QIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHHSSEM 263

Query: 890  LN---SHSSMISN-IQDTESQHEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLL 1057
            LN    H   IS  IQD      VNC                   L++G+LY+RE +RLL
Sbjct: 264  LNWNADHKDSISTGIQD------VNCQ------------------LVNGSLYERETERLL 299

Query: 1058 DGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPL 1237
            DGLGPRFIDWW  KPLPVDADLL E VPGF+PP+R+C P    KLTD ELT+FR LA+ L
Sbjct: 300  DGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQSL 359

Query: 1238 PTHFVL 1255
            PTHFVL
Sbjct: 360  PTHFVL 365


>ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|222870750|gb|EEF07881.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  269 bits (687), Expect = 1e-69
 Identities = 152/360 (42%), Positives = 205/360 (56%), Gaps = 5/360 (1%)
 Frame = +2

Query: 191  TNEESTEQDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQ 355
            TN  S     + +K PT PW+KGPL++Q ++      P  K+  K  + E+  KAL  K+
Sbjct: 14   TNPISQSNATTNVKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKIEKDDKALTAKE 73

Query: 356  GCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSK 535
               RG K M ++ +  E+LQR  N   TQ        + S  G+          +G   K
Sbjct: 74   SGVRGNKAMIQIVKSVERLQRDENLKDTQ--------EISENGV----------LGFREK 115

Query: 536  KMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVID 715
            K+PWV+++++   R+KKE+++S AEL+ D  LL+RL                 V QSV+D
Sbjct: 116  KLPWVREERVGNWRMKKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVVD 175

Query: 716  QVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHSGLN 895
            ++R  WR +ELAM+KF +PLCRNM RAR+I E  TGG VVW  KD   VY+GCNY    N
Sbjct: 176  EIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKKN 233

Query: 896  SHSSMISNIQDTESQHEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPR 1075
             +++ I    +T+                           I+G+L++RE DRLLDGLGPR
Sbjct: 234  FNTATIEENLNTQP--------------------------INGSLFERETDRLLDGLGPR 267

Query: 1076 FIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVL 1255
            F+DWW RKPLPVDADLL EVV GF+ P R+C P +R KL DDELT+ R LA+ LPTHFVL
Sbjct: 268  FVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYLRKLAQSLPTHFVL 327


>ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 760

 Score =  255 bits (651), Expect = 2e-65
 Identities = 161/404 (39%), Positives = 218/404 (53%), Gaps = 42/404 (10%)
 Frame = +2

Query: 170  TWRPLKATNEESTEQDASFIKAP-----------TAPWMKGPLLVQENQRPTTKRDPKFL 316
            T  P+ AT   ST   +S +  P           TAPWMK PL +Q  Q+     DP   
Sbjct: 31   THNPISAT---STPSQSSVLPEPPSISNAAVNLRTAPWMKAPLHLQPQQQEEEGVDPANP 87

Query: 317  QFERTGKALFGKQGCGR----------GKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKF 466
            +  R G    G+  C R          GK  M ++ +   KL+R  +   T+    E++F
Sbjct: 88   K-RRNGSDGSGRDKCSRALGDSGIDKTGKYAMRRIAKSIGKLRRNGDLGETRMKLEEVEF 146

Query: 467  -KFSSQGLFGDTQNKLDKIGIDSKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRL 643
              F  +G F ++  +        ++MPW KDD  ++ R  K++ ++SAELN D  LL+RL
Sbjct: 147  GDFDLEG-FEESGTR--------RRMPWEKDDDGIVLRRMKKKTVTSAELNLDRVLLERL 197

Query: 644  XXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTG 823
                             V Q V++Q++F+W  NELAMLKFD+PL RNM+RAREI E+KTG
Sbjct: 198  KGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTG 257

Query: 824  GFVVWVNKDALFVYKGCNYHSGLNSHSSMISNIQ-------DTESQHEVNCH-----DQS 967
            G VVW  K+AL +Y+GCNY   L   +    +I        +T++   ++ H     ++S
Sbjct: 258  GMVVWSKKNALVIYRGCNYPLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRS 317

Query: 968  QDEMLGKTENDGSNLLI--------SGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADL 1123
             ++  G+ E   S  LI        SG+LY+RE DRLLD LGPRFIDWW  KPLPVDAD+
Sbjct: 318  INDNDGEWEEASSFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADM 377

Query: 1124 LQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVL 1255
            LQEVVPG+ PP+R C P  +  LTD  L H R LA  LPTHFVL
Sbjct: 378  LQEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVL 421