BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022779
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   204   7e-51
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   125   4e-27
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   122   3e-26
emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera]   121   8e-26
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   118   6e-25

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  204 bits (519), Expect = 7e-51
 Identities = 100/141 (70%), Positives = 121/141 (85%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPNNMARLEEKAHSTL 294
           MS   +KI +FTGRNSFSLWQIK+RALLK++G WAPL K+  A++   MA LEEKAHST+
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHSTI 60

Query: 295 ILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLRIQEGTSLKNHLD 474
           +L L D+VITEVS+E+T AGLWLKLESLYMTKSLTNKLLLK+RLFGLR+ EGT L+ HL+
Sbjct: 61  MLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLE 120

Query: 475 HLNSILLDLHNIDIKIEDEDA 537
            LN++LL+L NID+KIEDEDA
Sbjct: 121 QLNTLLLELRNIDVKIEDEDA 141


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 3/136 (2%)
 Frame = +1

Query: 136 IKRFTGRNSFSLWQIKVRALLKREGLWAPLM--KNPPALLPNNMA-RLEEKAHSTLILAL 306
           +++FTG+N F L ++K+RALL ++GL   L+  KN P+ +       L EKAHS +IL+L
Sbjct: 8   VEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSAIILSL 67

Query: 307 DDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLRIQEGTSLKNHLDHLNS 486
            D V+ E ++  + A +WLKLESLYMTKSL N+L  K +L+  ++  G S++ HLDH N 
Sbjct: 68  GDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEXHLDHFNK 127

Query: 487 ILLDLHNIDIKIEDED 534
           I+LDL NIDI I DED
Sbjct: 128 IILDLENIDITISDED 143


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPL---MKNPPALLPNNMARLEEKAH 285
           MSG   ++ +F G N FS WQ ++R LL ++GL   L    K P  +   + A L+E+A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 286 STLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLRIQEGTSLKN 465
           S + L L D+V+  + +EDT  G+W +LESLYM+K+LTNKL LK++L+ L + EGT+  +
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120

Query: 466 HLDHLNSILLDLHNIDIKIEDED 534
           HL+  N ++  L N+ +KIE+ED
Sbjct: 121 HLNVFNGLITQLANLGVKIEEED 143


>emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera]
          Length = 253

 Score =  121 bits (303), Expect = 8e-26
 Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
 Frame = +1

Query: 136 IKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLP---NNMARLEEKAHSTLILAL 306
           ++ FT +N F LW++K+RA L ++GL   L++    L      +   L EKAHS ++L+L
Sbjct: 8   VEEFTSKNDFRLWRLKMRAFLVQQGLQDALLREKNLLSTMQEKHKIELLEKAHSAIVLSL 67

Query: 307 DDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLRIQEGTSLKNHLDHLNS 486
            D ++ EV++  + A LWLKLESLYMTKSL N+L  K +L+  ++  G S++ HLDH N 
Sbjct: 68  GDTLLREVAKAKSAAELWLKLESLYMTKSLGNRLHKKIKLYTFKMIPGMSIEEHLDHFNK 127

Query: 487 ILLDLHNIDIKIEDED 534
           I+LDL NIDI + DED
Sbjct: 128 IILDLENIDIVVLDED 143


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/137 (41%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
 Frame = +1

Query: 133 KIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKN---PPALLPNNMARLEEKAHSTLILA 303
           +I+RF G+N F++W+++++A+L ++G+   L      P  +     + ++EKA+  +ILA
Sbjct: 7   EIERFIGKNDFNVWRMRMKAILFQQGVKDALKDESELPVTMTAKEKSDIDEKAYHLIILA 66

Query: 304 LDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLRIQEGTSLKNHLDHLN 483
           L D+ + E SEE T  G+W KLE LYM  SL+N+L LKERL+G ++QE  S+ ++LD   
Sbjct: 67  LGDKALREFSEETTAKGVWNKLEQLYMQNSLSNRLYLKERLYGFKMQEDRSIADNLDDFA 126

Query: 484 SILLDLHNIDIKIEDED 534
            I+L++ NI IK++DED
Sbjct: 127 KIVLEMSNIGIKVDDED 143