BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022742
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   347   2e-93
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...   343   5e-92
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   342   1e-91
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   332   8e-89
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...   331   2e-88

>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  347 bits (891), Expect = 2e-93
 Identities = 163/234 (69%), Positives = 202/234 (86%)
 Frame = -2

Query: 706 ISGFSAVKDVNFIRNYCSGKTVSNETNEFTEEVEYLDESGSVIYSGKGIRSVEPGVDDHV 527
           +S    VK  +F+RNYC+GK     + E+TE++EYLDESGSVIYSGKGIRSVEPGVDDHV
Sbjct: 19  VSNGGHVKANSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVDDHV 78

Query: 526 MVGGIKKPILNASAVAKIVEIVRRWKWGPDMETQLDKLQFVPNMTQIMQALKVIGDSDAS 347
           M+GG+KKPILNASAVAKIVE+V+RWKWGP++ETQLDKLQFVPNMT ++QALK+I +SDA 
Sbjct: 79  MIGGLKKPILNASAVAKIVEVVKRWKWGPELETQLDKLQFVPNMTHVVQALKIINESDAL 138

Query: 346 LSLFRWAKRQSWYCSSDDLYTILFDKLNQSRDYDSIQSVFDDMVGDSSENGISPFSVYNR 167
           LSLF+WAKRQ+WY  +D+ Y +LFD LNQSRD+D IQS+FD+MV DS ++  + FS YNR
Sbjct: 139 LSLFKWAKRQTWYVPNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSA-TQFSAYNR 197

Query: 166 VIQYLAKAEKFEVAFCCFKKIQESGSEVDSVTYNSLLTLFLNKGLPYKAFEIFE 5
           V++YLAKAEK EV+FCCFKK+Q+SG ++D+ TYN L+ LFLNKGLPYKAFEI+E
Sbjct: 198 VLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYE 251


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score =  343 bits (880), Expect = 5e-92
 Identities = 162/225 (72%), Positives = 194/225 (86%)
 Frame = -2

Query: 676 NFIRNYCSGKTVSNETNEFTEEVEYLDESGSVIYSGKGIRSVEPGVDDHVMVGGIKKPIL 497
           +F R+YCSGK   N   E+TE++EYLDESGSVI+SGKG+RSVEPGVDDHVMVGG+KKP L
Sbjct: 66  SFTRSYCSGKESGNGGREWTEDIEYLDESGSVIFSGKGVRSVEPGVDDHVMVGGLKKPFL 125

Query: 496 NASAVAKIVEIVRRWKWGPDMETQLDKLQFVPNMTQIMQALKVIGDSDASLSLFRWAKRQ 317
           NASAVAKIVE+VRRWKWGP++E+QL+KLQFVPNMT I Q LK+I D++ASLSLFRWAKRQ
Sbjct: 126 NASAVAKIVEVVRRWKWGPELESQLEKLQFVPNMTHITQVLKIIDDAEASLSLFRWAKRQ 185

Query: 316 SWYCSSDDLYTILFDKLNQSRDYDSIQSVFDDMVGDSSENGISPFSVYNRVIQYLAKAEK 137
           SWY  +D+ Y +LFD LNQ RD+D+IQ +FD++V D S +    FS YNRVIQYLAKAEK
Sbjct: 186 SWYSPNDECYGLLFDGLNQRRDFDAIQLLFDEVVRDLSSDETVSFSAYNRVIQYLAKAEK 245

Query: 136 FEVAFCCFKKIQESGSEVDSVTYNSLLTLFLNKGLPYKAFEIFEN 2
            EV+FCCFKKI +SG +VD+ TYNSL+TLFLNKGLPYKAFEI+E+
Sbjct: 246 LEVSFCCFKKIHDSGFKVDTQTYNSLITLFLNKGLPYKAFEIYES 290


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  342 bits (876), Expect = 1e-91
 Identities = 180/323 (55%), Positives = 228/323 (70%), Gaps = 27/323 (8%)
 Frame = -2

Query: 889 MFFRSRLSPNNLKHTRQVISKFSGPLRSNHTFVCSNS-FRVNHCTKVRIVSYLWNFNSGI 713
           MF+R RL P +L      ++K  G     H  +  NS FR N      ++   + FNS  
Sbjct: 1   MFYRGRLCPPHLYK----LAKNPGYKPYFHASISQNSSFRTNG-----VIDTWFQFNSP- 50

Query: 712 RTISG-------FSAVKDVNFI-------------------RNYCSGKTVSNETNEFTEE 611
           R+I G       FS  K+ NF+                   RNYCSG      + ++TE+
Sbjct: 51  RSILGLHLFPSIFSLSKNPNFLFHTKYATDIPYCSKDSYFARNYCSGNINEGGSAKWTED 110

Query: 610 VEYLDESGSVIYSGKGIRSVEPGVDDHVMVGGIKKPILNASAVAKIVEIVRRWKWGPDME 431
           +EYLDESGSVIYSGKGIRSVEPG+DDHVMVGG+KKP LN +AVAKIVEIV+RWKWGP++E
Sbjct: 111 IEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPFLNVAAVAKIVEIVKRWKWGPELE 170

Query: 430 TQLDKLQFVPNMTQIMQALKVIGDSDASLSLFRWAKRQSWYCSSDDLYTILFDKLNQSRD 251
           TQLDKLQFVP+MT ++QALK+I D+D  LSLF+WAKRQ+WY   D+ Y +LFD LN+ RD
Sbjct: 171 TQLDKLQFVPSMTHVVQALKIINDADGMLSLFKWAKRQTWYVVDDECYALLFDGLNKIRD 230

Query: 250 YDSIQSVFDDMVGDSSENGISPFSVYNRVIQYLAKAEKFEVAFCCFKKIQESGSEVDSVT 71
           +D IQS+FD+MV DSS+ GIS    YNRVIQ+LAKAEK E++FCCFKK+Q+SG ++D+ T
Sbjct: 231 FDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQT 290

Query: 70  YNSLLTLFLNKGLPYKAFEIFEN 2
           YN+L+T FLNKGLPYKAFEI+E+
Sbjct: 291 YNALITSFLNKGLPYKAFEIYES 313


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score =  332 bits (852), Expect = 8e-89
 Identities = 163/263 (61%), Positives = 204/263 (77%), Gaps = 20/263 (7%)
 Frame = -2

Query: 730 NFNSGIRTISGF----------SAVKDVNFI----------RNYCSGKTVSNETNEFTEE 611
           +F+  IR +S F          S  +D NF+          R +CS K+  +E++ +TEE
Sbjct: 37  SFSFNIRLLSSFTVRNGFCPDCSVPRDPNFVGLTTQSRSIVRRFCSEKSGGSESSGWTEE 96

Query: 610 VEYLDESGSVIYSGKGIRSVEPGVDDHVMVGGIKKPILNASAVAKIVEIVRRWKWGPDME 431
           VEYLDESGSV++SGKGIRSVEPG+DDHVMVGG+KKP +NASAVAKIVE+V+RWKWGP++E
Sbjct: 97  VEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNASAVAKIVEVVQRWKWGPELE 156

Query: 430 TQLDKLQFVPNMTQIMQALKVIGDSDASLSLFRWAKRQSWYCSSDDLYTILFDKLNQSRD 251
           TQLDKLQFVPNM  I Q+LK++ + DA+LSLFRWAK+Q WY  SD+ Y +LFD LNQ RD
Sbjct: 157 TQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRD 216

Query: 250 YDSIQSVFDDMVGDSSENGISPFSVYNRVIQYLAKAEKFEVAFCCFKKIQESGSEVDSVT 71
           +  IQS+F++MV DSS +G   F  YN+VIQYLAKAEK EVAFCCFKK QESG ++D+ T
Sbjct: 217 FVGIQSLFEEMVQDSSSHGDLSFGAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQT 276

Query: 70  YNSLLTLFLNKGLPYKAFEIFEN 2
           YN+L+ LFLNKGLPYKAFEI+E+
Sbjct: 277 YNNLMMLFLNKGLPYKAFEIYES 299


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
           DEFECTIVE 2217; Flags: Precursor
           gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
           thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  331 bits (849), Expect = 2e-88
 Identities = 154/225 (68%), Positives = 193/225 (85%)
 Frame = -2

Query: 676 NFIRNYCSGKTVSNETNEFTEEVEYLDESGSVIYSGKGIRSVEPGVDDHVMVGGIKKPIL 497
           + +R +CS K  S+E++ +TEEVEYLDESGSV++SGKGIRSVEPG+DDHVMVGG+KKP +
Sbjct: 79  SIVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYM 138

Query: 496 NASAVAKIVEIVRRWKWGPDMETQLDKLQFVPNMTQIMQALKVIGDSDASLSLFRWAKRQ 317
           NAS+VAKIVE+V+RWKWGP++ETQLDKLQFVPNM  I Q+LK++ + DA+LSLFRWAK+Q
Sbjct: 139 NASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQ 198

Query: 316 SWYCSSDDLYTILFDKLNQSRDYDSIQSVFDDMVGDSSENGISPFSVYNRVIQYLAKAEK 137
            WY  SD+ Y +LFD LNQ RD+  IQS+F++MV DSS +G   F+ YN+VIQYLAKAEK
Sbjct: 199 PWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEK 258

Query: 136 FEVAFCCFKKIQESGSEVDSVTYNSLLTLFLNKGLPYKAFEIFEN 2
            EVAFCCFKK QESG ++D+ TYN+L+ LFLNKGLPYKAFEI+E+
Sbjct: 259 LEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303