BLASTX nr result

ID: Lithospermum22_contig00022643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022643
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]               153   2e-35
ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223...   131   1e-28
ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...   130   2e-28
ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]         129   4e-28
ref|XP_003519842.1| PREDICTED: cyclin-D4-1 [Glycine max]              124   2e-26

>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score =  153 bits (387), Expect = 2e-35
 Identities = 78/143 (54%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = +2

Query: 167 DLLCDENQNMCFDDLNGFVDPTETNGINCENDDKVSNFMHN-KSDPLMDLASLSEDEFEM 343
           +LLC E +++CFDD    VD    +  N E   K  +F +  +S+PL+DL SLSE+    
Sbjct: 13  NLLCTETKSLCFDD----VDSLTISQQNIETKSKDLSFNNGIRSEPLIDLPSLSEECLSF 68

Query: 344 MIVREMDNLPKNDYLERLKKGELDVSVRKECVEWIWKAHMHYGFTEQCFALAVNYYDRFM 523
           M+ REM+ LPK+DY+ERL+ G+LD+SVRKE ++WI KAHMHYGF E  F L++NY DRF+
Sbjct: 69  MVQREMEFLPKDDYVERLRSGDLDLSVRKEALDWILKAHMHYGFGELSFCLSINYLDRFL 128

Query: 524 SDYELPRGAAWANQLLAVACLSL 592
           S YELPR   W  QLLAVACLSL
Sbjct: 129 SLYELPRSKTWTVQLLAVACLSL 151


>ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1|
           cyclin d, putative [Ricinus communis]
          Length = 366

 Score =  131 bits (329), Expect = 1e-28
 Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 9/157 (5%)
 Frame = +2

Query: 149 MAKNSIDLLCDENQNMCFDDLNGFVDPTETNGINCE-----NDDKVSNFMHNKSDP---- 301
           MA+N   LLC EN N CF DL     P E  GI        N ++  +F +N  D     
Sbjct: 1   MAQN---LLCAENTNTCFSDLLDCNAPDEL-GIPLSWHHQVNRNRRESFFNNSDDSCKSS 56

Query: 302 LMDLASLSEDEFEMMIVREMDNLPKNDYLERLKKGELDVSVRKECVEWIWKAHMHYGFTE 481
           LM L   SED  + M+ REM +LP++DYL+RL+ G+LD+  R++ ++WIWK   HY F+ 
Sbjct: 57  LMGLTINSEDRVKEMVEREMKHLPRDDYLKRLRSGDLDMGSRRQAIDWIWKVQAHYSFSA 116

Query: 482 QCFALAVNYYDRFMSDYELPRGAAWANQLLAVACLSL 592
               L++NY DRF+S Y+LP+G AW  QLLAVACLSL
Sbjct: 117 LSVCLSMNYLDRFLSVYQLPKGKAWTMQLLAVACLSL 153


>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score =  130 bits (327), Expect = 2e-28
 Identities = 64/142 (45%), Positives = 91/142 (64%)
 Frame = +2

Query: 167 DLLCDENQNMCFDDLNGFVDPTETNGINCENDDKVSNFMHNKSDPLMDLASLSEDEFEMM 346
           +LLC EN + CFDD+       + +GI+   D    N  +  SD  +   + SE+  ++M
Sbjct: 11  NLLCSENNSTCFDDV-----VVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEEIVKVM 65

Query: 347 IVREMDNLPKNDYLERLKKGELDVSVRKECVEWIWKAHMHYGFTEQCFALAVNYYDRFMS 526
           + +E D+LP+ DYL RL+ G+LD+SVR+E ++WIWKAH +YGF      L+VNY DRF+S
Sbjct: 66  VEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLS 125

Query: 527 DYELPRGAAWANQLLAVACLSL 592
            ++ PRG  W  QLLAVAC SL
Sbjct: 126 VFQFPRGVTWTVQLLAVACFSL 147


>ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]
          Length = 351

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/145 (45%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
 Frame = +2

Query: 170 LLCDENQNMCFDDLNGFVDPTETNGINCENDDKVSNFM----HNKSDPLMDLASLSEDEF 337
           LLC EN +MCFDD +  V   E+  ++ +N +  + ++    H+ S+ L+D +  S++  
Sbjct: 12  LLCLENNDMCFDDFDCNV-ADESPSLDHKNLNFNNQYLIKDNHHGSEHLLDFSVQSDETV 70

Query: 338 EMMIVREMDNLPKNDYLERLKKGELDVSVRKECVEWIWKAHMHYGFTEQCFALAVNYYDR 517
             ++ RE +NLP++ YL+RL  G+LD+SVRKE ++WIWKAH ++ F      L+VNY DR
Sbjct: 71  LGLVGREKENLPQDGYLKRLLSGDLDLSVRKEALDWIWKAHAYFDFGPCSLCLSVNYLDR 130

Query: 518 FMSDYELPRGAAWANQLLAVACLSL 592
           F+S YELPRG +W+ QLLAVACLS+
Sbjct: 131 FLSVYELPRGKSWSMQLLAVACLSI 155


>ref|XP_003519842.1| PREDICTED: cyclin-D4-1 [Glycine max]
          Length = 230

 Score =  124 bits (310), Expect = 2e-26
 Identities = 68/156 (43%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = +2

Query: 152 AKNSIDLLCDENQNMCFDDLNGFVDPTETNGINCEN-DDKVSNFMHNKSDPLMDL----- 313
           A +++ LLC EN + CFDD          +G+ C+  D   S   H++     +L     
Sbjct: 8   ATSNLLLLCSENSSTCFDD----------DGLECDAADGSNSRISHHEGGGGSELLLACF 57

Query: 314 ASLSEDEFEMMIVREMDNLPKNDYLERLKKGELDVS---VRKECVEWIWKAHMHYGFTEQ 484
            + SE+    M+ RE ++LP++DYL RL+ G LD+    VRKE ++WIWKAH + GF   
Sbjct: 58  VAQSEEAVRAMVEREKEHLPRDDYLMRLRSGGLDLDLLGVRKEALDWIWKAHSYLGFGPL 117

Query: 485 CFALAVNYYDRFMSDYELPRGAAWANQLLAVACLSL 592
            F LAVNY DRF+S +ELPRG +W  QLLAVACLS+
Sbjct: 118 SFCLAVNYLDRFLSVFELPRGVSWTVQLLAVACLSI 153


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