BLASTX nr result

ID: Lithospermum22_contig00022637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022637
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...    82   5e-14
emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera]    82   5e-14
emb|CBI18109.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...    77   2e-12

>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
           predicted protein [Populus trichocarpa]
          Length = 1186

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
 Frame = +3

Query: 36  MATWKIISDSGNNFRFKISDEQLHIKQSP------VP---DPLRLPSMSDLLLQGCGKLM 188
           M++WKI SDSGNNFR++++ + +H K  P      +P       LPSM+DLLLQGC KL+
Sbjct: 1   MSSWKIFSDSGNNFRWEVTGQIIHTKPEPKQSGALIPPSSSKTHLPSMADLLLQGCPKLL 60

Query: 189 ENGNVNAEDTPMFCTGSGKXXXXXXXXXXXXXXILGDEDDVFQSSGRVVGVENGFNHSNS 368
           ENGN      P+F TGSGK              +L D+DD    +G   G EN  +    
Sbjct: 61  ENGN-----APIFRTGSGKSVALKQSSIAKALSVLRDDDD----AGEACGGENELSF--- 108

Query: 369 ISNSRGAIGKQNSSLKRIATDSNS---MFTTGSGKAV 470
                       S L++   + N    +F TGSGK+V
Sbjct: 109 ------------SKLRKKGNEDNGNAPIFHTGSGKSV 133


>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = +3

Query: 36  MATWKIISDSGNNFRFKISDEQLHIKQ---------SPVPDPLRLPSMSDLLLQGCGKLM 188
           M+TW+I SDS N+FR++ISD Q   K           P     RLPSM DLLLQGC K++
Sbjct: 1   MSTWQIFSDSDNDFRWEISDAQSLTKPVEEASGAPIQPYDSTSRLPSMVDLLLQGCSKIL 60

Query: 189 ENGNVNAEDTPMFCTGSGKXXXXXXXXXXXXXXILGDEDDVFQSSGRVVGVENGFNHSNS 368
           EN     E  PMF TG GK              +LGD+D  F + G+    +NG   SNS
Sbjct: 61  ENDGPCVESPPMFRTGLGKSVTVKQSSIAKALSVLGDDD--FGAGGQDHDRDNGCGFSNS 118

Query: 369 I 371
           +
Sbjct: 119 L 119


>emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera]
          Length = 288

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = +3

Query: 36  MATWKIISDSGNNFRFKISDEQLHIKQ---------SPVPDPLRLPSMSDLLLQGCGKLM 188
           M+TW+I SDS N+FR++ISD Q   K           P     RLPSM DLLLQGC K++
Sbjct: 1   MSTWQIFSDSDNDFRWEISDAQSLTKPVEEASGAPIQPYDSTSRLPSMVDLLLQGCSKIL 60

Query: 189 ENGNVNAEDTPMFCTGSGKXXXXXXXXXXXXXXILGDEDDVFQSSGRVVGVENGFNHSNS 368
           EN     E  PMF TG GK              +LGD+D  F + G+    +NG   SNS
Sbjct: 61  ENDGPCVESPPMFRTGLGKSVTVKQSSIAKALSVLGDDD--FGAGGQDHDRDNGCGFSNS 118

Query: 369 I 371
           +
Sbjct: 119 L 119


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 65/180 (36%), Positives = 81/180 (45%), Gaps = 35/180 (19%)
 Frame = +3

Query: 36  MATWKIISDSGNNFRFKISDEQLHIKQ---------SPVPDPLRLPSMSDLLLQGCGKLM 188
           M+TW+I SDS N+FR++ISD Q   K           P     RLPSM DLLLQGC K++
Sbjct: 1   MSTWQIFSDSDNDFRWEISDAQSLTKPVEEASGAPIQPYDSTSRLPSMVDLLLQGCSKIL 60

Query: 189 ENGNVNAEDTPMFCTGSGKXXXXXXXXXXXXXXILGDEDDVFQSSGRVVGVENGFNHSNS 368
           EN     E  PMF TG GK              +LGD+D  F + G    +   F H + 
Sbjct: 61  ENDGPCVESPPMFRTGLGKSVTVKQSSIAKALSVLGDDD--FGAGGAQCSL--FFYHLDY 116

Query: 369 ISNSRGAIGK------------QNSSLKRIATD--------------SNSMFTTGSGKAV 470
           +S +  AIG             QN S K +                 SNS+F TGSGK V
Sbjct: 117 LSFA-DAIGSTISFKEHCSGQDQNISQKDLLLPGPDPDHDRDNGCGFSNSLFQTGSGKMV 175


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis] gi|223533978|gb|EEF35700.1| breast
           cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis]
          Length = 1156

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
 Frame = +3

Query: 36  MATWKIISDSGNNFRFKISDEQLHIKQ----SPVPDPLR---LPSMSDLLLQGCGKLMEN 194
           M+TW+I SD+G +FR++ S + LH  +    +  P   R   LPSM+DLLLQGC KL+EN
Sbjct: 1   MSTWQIFSDAGKSFRWESSSQILHSDRPNDAAIQPHSCRAPPLPSMADLLLQGCTKLLEN 60

Query: 195 GNVNAEDTPMFCTGSGKXXXXXXXXXXXXXXILGDEDDVFQSSGRVVGVEN--GFNHSNS 368
           G V   +  MF TG GK              +LGD+DD   SSG     EN  GF HS  
Sbjct: 61  G-VEDGNPMMFRTGLGKSVVLKQSSISKALSVLGDDDDGL-SSGETHARENAHGFTHSLF 118

Query: 369 ISNSRGAIGKQNSSLKRIAT 428
            + S  ++   ++ L R  T
Sbjct: 119 CTGSGKSVNVSSAGLVRAKT 138


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