BLASTX nr result

ID: Lithospermum22_contig00022576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022576
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Gly...   202   7e-50
ref|XP_002521261.1| conserved hypothetical protein [Ricinus comm...   198   8e-49
gb|AFK40444.1| unknown [Lotus japonicus]                              197   1e-48
ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cuc...   197   2e-48
gb|AFK46232.1| unknown [Medicago truncatula]                          194   1e-47

>ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Glycine max]
          Length = 178

 Score =  202 bits (513), Expect = 7e-50
 Identities = 97/124 (78%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
 Frame = +1

Query: 70  WVVRNQVIMEREVVEAELVLPSHFKFKKIQSYDKYPKGQSKVR-WKHIKQIIQAENYQNY 246
           WVVR    ME EVVEAELVLPS+  FK++Q Y+KYPKGQ++ R WKH+KQIIQAENYQNY
Sbjct: 48  WVVRTGK-MEAEVVEAELVLPSYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNY 106

Query: 247 PPDEPNYVNIESPPPMCPCKRICDITGYEAPYFDPRTKLRYANAEVFKIIRSLPPDYVKR 426
           PPDEPNY NIESPP M PCKRICDITG+EAPY DPRT LRYANAEVFKIIRSLP +YV+R
Sbjct: 107 PPDEPNYANIESPPSMHPCKRICDITGFEAPYHDPRTNLRYANAEVFKIIRSLPNEYVQR 166

Query: 427 YLAL 438
           YL+L
Sbjct: 167 YLSL 170


>ref|XP_002521261.1| conserved hypothetical protein [Ricinus communis]
           gi|223539529|gb|EEF41117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  198 bits (504), Expect = 8e-49
 Identities = 91/116 (78%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  MEREVVEAELVLPSHFKFKKIQSYDKYPKGQSKVR-WKHIKQIIQAENYQNYPPDEPNYV 270
           ME EV++AELVLP+H  FKKIQ Y+KYPKGQ++ R WKH+KQI+QAENYQNYPPDEPNYV
Sbjct: 1   MEAEVIKAELVLPTHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAENYQNYPPDEPNYV 60

Query: 271 NIESPPPMCPCKRICDITGYEAPYFDPRTKLRYANAEVFKIIRSLPPDYVKRYLAL 438
           NIESPP M PCKRICDITG+EAPY DPRT LRYA+A+VFK++RSLP DYV+RYLAL
Sbjct: 61  NIESPPSMHPCKRICDITGFEAPYSDPRTNLRYASADVFKLVRSLPNDYVQRYLAL 116


>gb|AFK40444.1| unknown [Lotus japonicus]
          Length = 124

 Score =  197 bits (502), Expect = 1e-48
 Identities = 91/116 (78%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  MEREVVEAELVLPSHFKFKKIQSYDKYPKGQSKVR-WKHIKQIIQAENYQNYPPDEPNYV 270
           ME EVV+AELVLP++  FK++Q ++KYPKGQS+ R WKH+KQIIQAENYQNYPPD+PNYV
Sbjct: 1   MEAEVVDAELVLPNYLSFKRVQMHEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDQPNYV 60

Query: 271 NIESPPPMCPCKRICDITGYEAPYFDPRTKLRYANAEVFKIIRSLPPDYVKRYLAL 438
           NIESPP M PCKRICDITGYEAPY+DPRT LRYAN +VFKIIR+LP DYV+RYLAL
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLAL 116


>ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cucumis sativus]
           gi|449521619|ref|XP_004167827.1| PREDICTED: INO80
           complex subunit C-like [Cucumis sativus]
          Length = 124

 Score =  197 bits (500), Expect = 2e-48
 Identities = 90/116 (77%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  MEREVVEAELVLPSHFKFKKIQSYDKYPKGQSKVR-WKHIKQIIQAENYQNYPPDEPNYV 270
           ME EV+EAELVLP H  FK+IQ Y+KYPKGQS+ R WKH+KQI+QAENY NY PDEPNYV
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYV 60

Query: 271 NIESPPPMCPCKRICDITGYEAPYFDPRTKLRYANAEVFKIIRSLPPDYVKRYLAL 438
           NIESPP M PCKRICDITGYEAPY+DPRT LRYANA++FK+IRSLP +YV+RYLA+
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAM 116


>gb|AFK46232.1| unknown [Medicago truncatula]
          Length = 129

 Score =  194 bits (494), Expect = 1e-47
 Identities = 90/116 (77%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
 Frame = +1

Query: 94  MEREVVEAELVLPSHFKFKKIQSYDKYPKGQSKVR-WKHIKQIIQAENYQNYPPDEPNYV 270
           ME EVV+AELVLP++  FK+IQ YDKYPKGQS+ R WKH+KQIIQAENYQNYPPDEPNYV
Sbjct: 6   MEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYV 65

Query: 271 NIESPPPMCPCKRICDITGYEAPYFDPRTKLRYANAEVFKIIRSLPPDYVKRYLAL 438
           NIESPP M PCKRICDITGYEAPY+DP+T LRYAN +VFK+IRSLP + V+RYL +
Sbjct: 66  NIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGM 121


Top