BLASTX nr result

ID: Lithospermum22_contig00022555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022555
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    74   9e-12
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    70   7e-11
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    58   2e-10

>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/88 (48%), Positives = 46/88 (52%)
 Frame = +1

Query: 1   FRAASRPGPTGGHLSQGKHYCSPPPEKQKIGESRRKIHA*IVV*CQGRRRKLGTEPYEAE 180
           FRA S PGPTGGHL Q K +CSPPP+KQKI ES                           
Sbjct: 285 FRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES--------------------------- 317

Query: 181 VSRTVL*EGSGYLLELRPTTTGQFRFGA 264
                    SGYLLELRPTTTG+FRFGA
Sbjct: 318 ---------SGYLLELRPTTTGKFRFGA 336


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 70.5 bits (171), Expect(2) = 7e-11
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = -2

Query: 119 YACIFRLDSPIFCFSGGGEQ*CLPCDKCPPVGPGLLAAR 3
           YAC+FRLDS IFCFSGGGEQ  L C +CPPVGPGLL AR
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPAR 277



 Score = 21.2 bits (43), Expect(2) = 7e-11
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 138 LALDHYLCMY 109
           L+LDHY C++
Sbjct: 234 LSLDHYACLF 243


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 57.8 bits (138), Expect(2) = 2e-10
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -2

Query: 101 LDSPIFCFSGGGEQ*CLPCDKCPPVGPGLLAAR 3
           LDS IFCFSGGGEQ  L C +CPPVGPGLL AR
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPAR 84



 Score = 32.3 bits (72), Expect(2) = 2e-10
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 261 PKAELTGGGWSKL 223
           PKAELTGGGWSKL
Sbjct: 38  PKAELTGGGWSKL 50


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