BLASTX nr result

ID: Lithospermum22_contig00022485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022485
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    99   4e-19
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar...    89   3e-16
emb|CAB62654.1| putative protein [Arabidopsis thaliana]                89   3e-16
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/90 (51%), Positives = 64/90 (71%)
 Frame = +1

Query: 1    LFTSVHFQGNGNLGEKIAKELTEQDPLNFSYYALLVNVYAVSGRWEEVIQTKDLMKSMGI 180
            L +S  FQG   LGE+IA  L E +P N SYY LL+NVYAV+GRWE+V + K+++K  GI
Sbjct: 802  LLSSCRFQGXVFLGERIATYLIESEPQNISYYRLLLNVYAVAGRWEDVARVKEMVKERGI 861

Query: 181  LKVPGCSLKDLQEVVQNTKVEEEWQSREDV 270
             ++PGC+L DL+E+V   K+ E+WQ   +V
Sbjct: 862  KQMPGCNLADLKEIVHEFKLGEKWQQGMEV 891


>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332645257|gb|AEE78778.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   LFTSVHFQGNGNLGEKIAKELTEQDPLNFSYYALLVNVYAVSGRWEEVIQTKDLMKSMGI 180
           L +S  F GN  LGE IAK L E DPLN+ YY LL+N+Y+V+GRWE+V + ++++K   I
Sbjct: 428 LLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI 487

Query: 181 LKVPGCSLKDLQEVVQNTKV 240
            ++PGC L DL+E+V   ++
Sbjct: 488 GRIPGCGLVDLKEIVHGLRL 507


>emb|CAB62654.1| putative protein [Arabidopsis thaliana]
          Length = 486

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   LFTSVHFQGNGNLGEKIAKELTEQDPLNFSYYALLVNVYAVSGRWEEVIQTKDLMKSMGI 180
           L +S  F GN  LGE IAK L E DPLN+ YY LL+N+Y+V+GRWE+V + ++++K   I
Sbjct: 384 LLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI 443

Query: 181 LKVPGCSLKDLQEVVQNTKV 240
            ++PGC L DL+E+V   ++
Sbjct: 444 GRIPGCGLVDLKEIVHGLRL 463


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = +1

Query: 1   LFTSVHFQGNGNLGEKIAKELTEQDPLNFSYYALLVNVYAVSGRWEEVIQTKDLMKSMGI 180
           L  S  FQGN  LGE+IA  L + +P N  +Y LL+NVYAV GRW++V   KDL+K+   
Sbjct: 466 LLNSCRFQGNVALGERIANSLIDMEPWNILHYRLLLNVYAVGGRWDDVAMVKDLVKTKMK 525

Query: 181 LKVPGCSLKDLQEVVQNTKV 240
            + PGC+L DL+E+V N +V
Sbjct: 526 GRTPGCNLVDLKEIVHNYEV 545


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/87 (47%), Positives = 58/87 (66%)
 Frame = +1

Query: 1   LFTSVHFQGNGNLGEKIAKELTEQDPLNFSYYALLVNVYAVSGRWEEVIQTKDLMKSMGI 180
           L T+  F G+ +LGE+IAK L + +P N SYY LL+N+YAV+GRWE+V + K LMK   +
Sbjct: 480 LLTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRL 539

Query: 181 LKVPGCSLKDLQEVVQNTKVEEEWQSR 261
             + GC L DL+E+V + K+    Q R
Sbjct: 540 GTMSGCRLVDLKEIVHSLKLGNHLQER 566


Top