BLASTX nr result

ID: Lithospermum22_contig00022473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022473
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA37963.1| SVP1 [Actinidia deliciosa]                             100   2e-19
gb|AFA37967.1| SVP1 [Actinidia chinensis]                              99   4e-19
ref|XP_002310310.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
gb|AEF32137.1| MADS-box protein, partial [Betula platyphylla]          93   3e-17
ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...    92   6e-17

>gb|AFA37963.1| SVP1 [Actinidia deliciosa]
          Length = 227

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = -3

Query: 247 GEKIMNEMDQLQQKEMQLMGENERLRLQVMDISDRRNNNSANSENVVYEGGRSSESVSNI 68
           GEKIMNE+  LQQK M LM ENERLR QVM+    R +++ +SENV+ E G+SSESV+NI
Sbjct: 143 GEKIMNEITHLQQKGMHLMDENERLRQQVMEACKARKHSATDSENVINEQGQSSESVTNI 202

Query: 67  CSSLSPQQDSVTSDTFLKLGLP 2
           C+S  P QD  +SDT LKLGLP
Sbjct: 203 CNSTGPMQDYESSDTSLKLGLP 224


>gb|AFA37967.1| SVP1 [Actinidia chinensis]
          Length = 227

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = -3

Query: 247 GEKIMNEMDQLQQKEMQLMGENERLRLQVMDISDRRNNNSANSENVVYEGGRSSESVSNI 68
           GEKIMNE+  LQQK M LM ENERLR QVM+    R +++ +S+NV+ E G+SSESV+NI
Sbjct: 143 GEKIMNEITHLQQKGMHLMDENERLRQQVMEACKARKHSATDSDNVINEQGQSSESVTNI 202

Query: 67  CSSLSPQQDSVTSDTFLKLGLP 2
           C+S  P QD  +SDT LKLGLP
Sbjct: 203 CNSTGPMQDYESSDTSLKLGLP 224


>ref|XP_002310310.1| predicted protein [Populus trichocarpa] gi|222853213|gb|EEE90760.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -3

Query: 247 GEKIMNEMDQLQQKEMQLMGENERLRLQVMDISDRRNNNSANSENVVYEGGRSSESVSNI 68
           GEKIMNE+  LQ+K MQLM ENERL+ QV++IS+ R + +A+SENV YE G+SSESV+N+
Sbjct: 143 GEKIMNEITDLQRKGMQLMEENERLKQQVVEISNGRKHVTADSENVGYEEGQSSESVTNV 202

Query: 67  CSSLSPQQDSVTSDTFLKLGLP 2
           C+S  P  D  +SDT LKLGLP
Sbjct: 203 CNSNGPLHDYESSDTSLKLGLP 224


>gb|AEF32137.1| MADS-box protein, partial [Betula platyphylla]
          Length = 91

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = -3

Query: 247 GEKIMNEMDQLQQKEMQLMGENERLRLQVMDISDRRNNNSANSENVVYEGGRSSESVSNI 68
           GEKIM E+  LQ+K MQLM ENERLR QV +IS+ R +  A+SENV+ E G+SSESV+N+
Sbjct: 6   GEKIMTEISDLQRKGMQLMEENERLRQQVAEISNGRRHVGADSENVITEEGQSSESVTNV 65

Query: 67  CSSL-SPQQDSVTSDTFLKLGLP 2
           C+S  +P  D  +SDT LKLGLP
Sbjct: 66  CNSTGAPPHDYESSDTSLKLGLP 88


>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
           gi|297744859|emb|CBI38273.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/82 (57%), Positives = 62/82 (75%)
 Frame = -3

Query: 247 GEKIMNEMDQLQQKEMQLMGENERLRLQVMDISDRRNNNSANSENVVYEGGRSSESVSNI 68
           GE+IM E+  LQ K +QLM ENERLR QV++IS+RR   + +SEN+ +E G+SSESV+N+
Sbjct: 143 GERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQVAGDSENMFHEEGQSSESVTNV 202

Query: 67  CSSLSPQQDSVTSDTFLKLGLP 2
            +S  P QD  +SDT LKLGLP
Sbjct: 203 SNSNGPPQDYESSDTSLKLGLP 224


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