BLASTX nr result

ID: Lithospermum22_contig00022412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022412
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   216   2e-54
ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|2...   214   5e-54
ref|XP_002529210.1| signalosome subunit, putative [Ricinus commu...   214   8e-54
gb|AAL58106.1|AF395063_1 CSN complex subunit 6A [Arabidopsis tha...   213   1e-53
gb|AAO42068.1| putative COP9 complex subunit 6 CSN6 [Arabidopsis...   213   1e-53

>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
           gi|296090054|emb|CBI39873.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  216 bits (549), Expect = 2e-54
 Identities = 105/114 (92%), Positives = 111/114 (97%)
 Frame = +3

Query: 3   KKVFPNFYVLGWYSMGSDAQESDMYIHKALMDINESPVYVLLNPAINPTQKELPVTIYES 182
           KKVFPNFY+LGWYS GSDAQESDM+IHKALMDINESPVYVLLNP+IN  QK+LPVTIYES
Sbjct: 101 KKVFPNFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES 160

Query: 183 ELHVIDGIPQLIFVQASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 344
           ELHVIDGIPQLIFV+A+YTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG
Sbjct: 161 ELHVIDGIPQLIFVRANYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 214


>ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|222872088|gb|EEF09219.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  214 bits (546), Expect = 5e-54
 Identities = 104/114 (91%), Positives = 111/114 (97%)
 Frame = +3

Query: 3   KKVFPNFYVLGWYSMGSDAQESDMYIHKALMDINESPVYVLLNPAINPTQKELPVTIYES 182
           KKVFP+FY+LGWYS GSDA+ESDM+IHKALMDINESPVYVLLNP+INP QK+LPVTIYES
Sbjct: 90  KKVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIYES 149

Query: 183 ELHVIDGIPQLIFVQASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 344
           ELHVIDGIPQLIFV +SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG
Sbjct: 150 ELHVIDGIPQLIFVCSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 203


>ref|XP_002529210.1| signalosome subunit, putative [Ricinus communis]
           gi|223531328|gb|EEF33166.1| signalosome subunit,
           putative [Ricinus communis]
          Length = 318

 Score =  214 bits (544), Expect = 8e-54
 Identities = 103/114 (90%), Positives = 111/114 (97%)
 Frame = +3

Query: 3   KKVFPNFYVLGWYSMGSDAQESDMYIHKALMDINESPVYVLLNPAINPTQKELPVTIYES 182
           KKVFP+FY+LGWYS GSDA+ESDM+IHKALMDINESPVYVLLNP+INP QK+LPV IYES
Sbjct: 102 KKVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVIIYES 161

Query: 183 ELHVIDGIPQLIFVQASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 344
           ELHVIDGIPQLIFV++SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG
Sbjct: 162 ELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 215


>gb|AAL58106.1|AF395063_1 CSN complex subunit 6A [Arabidopsis thaliana]
          Length = 317

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/114 (91%), Positives = 109/114 (95%)
 Frame = +3

Query: 3   KKVFPNFYVLGWYSMGSDAQESDMYIHKALMDINESPVYVLLNPAINPTQKELPVTIYES 182
           KKVFP+FY+LGWYS GSDA+ESDM+IHKALMDINESPVYVLLNPAIN TQK+LPVTIYES
Sbjct: 101 KKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYES 160

Query: 183 ELHVIDGIPQLIFVQASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 344
           ELHVIDGIPQLIF   SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG
Sbjct: 161 ELHVIDGIPQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 214


>gb|AAO42068.1| putative COP9 complex subunit 6 CSN6 [Arabidopsis thaliana]
          Length = 223

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/114 (91%), Positives = 109/114 (95%)
 Frame = +3

Query: 3   KKVFPNFYVLGWYSMGSDAQESDMYIHKALMDINESPVYVLLNPAINPTQKELPVTIYES 182
           KKVFP+FY+LGWYS GSDA+ESDM+IHKALMDINESPVYVLLNPAIN TQK+LPVTIYES
Sbjct: 7   KKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYES 66

Query: 183 ELHVIDGIPQLIFVQASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 344
           ELHVIDGIPQLIF   SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG
Sbjct: 67  ELHVIDGIPQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 120


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