BLASTX nr result

ID: Lithospermum22_contig00022378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022378
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863896.1| ATGLR1.3 [Arabidopsis lyrata subsp. lyrata] ...   107   8e-22
gb|AAD09173.1| putative glutamate receptor [Arabidopsis thaliana]     107   1e-21
ref|NP_199652.1| glutamate receptor 1.3 [Arabidopsis thaliana] g...   107   1e-21
ref|XP_002877069.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata] ...   106   2e-21
ref|XP_002863895.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata] ...   105   3e-21

>ref|XP_002863896.1| ATGLR1.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297309731|gb|EFH40155.1| ATGLR1.3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/89 (57%), Positives = 63/89 (70%)
 Frame = -1

Query: 269 NRSKYVDFTMPFTELELGTLVKLDKGNGWFFFEPFDSNLWTVGACFFVGLGIVVWIIEHP 90
           NRS Y DFT+PFTE+ LG +V L + + W FF+P   +LW   A FFV  GI+VW+IE  
Sbjct: 522 NRSMYADFTLPFTEMGLG-IVALKERSMWVFFQPLTPDLWITSAAFFVLTGIIVWLIERS 580

Query: 89  INEEFQGSVVKQIGTILWFSVSTLVYAHR 3
            N+EFQGS  +QIG +LWF  STLVYAHR
Sbjct: 581 ENKEFQGSWPQQIGVVLWFGFSTLVYAHR 609


>gb|AAD09173.1| putative glutamate receptor [Arabidopsis thaliana]
          Length = 808

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 NRSKYVDFTMPFTELELGTLVKLDKGNG-WFFFEPFDSNLWTVGACFFVGLGIVVWIIEH 93
           NRS YVDFT+P+T++ +G L    K  G W FF+PF+ +LW     FFV  GIVVW++E 
Sbjct: 504 NRSLYVDFTLPYTDIGIGILTVKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVER 563

Query: 92  PINEEFQGSVVKQIGTILWFSVSTLVYAHR 3
           P+N EFQGS  +Q+  +LWF  ST+V+AHR
Sbjct: 564 PVNPEFQGSWGQQLSMMLWFGFSTIVFAHR 593


>ref|NP_199652.1| glutamate receptor 1.3 [Arabidopsis thaliana]
           gi|41017230|sp|Q9FH75.1|GLR13_ARATH RecName:
           Full=Glutamate receptor 1.3; AltName: Full=Ligand-gated
           ion channel 1.3; Flags: Precursor
           gi|9758208|dbj|BAA96961.2| ligand-gated ion channel
           protein-like; glutamate receptor-like [Arabidopsis
           thaliana] gi|20268735|gb|AAM14071.1| putative
           ligand-gated ion channel protein; glutamate receptor
           [Arabidopsis thaliana] gi|23296781|gb|AAN13168.1|
           putative ligand-gated ion channel protein; glutamate
           receptor [Arabidopsis thaliana]
           gi|332008284|gb|AED95667.1| glutamate receptor 1.3
           [Arabidopsis thaliana]
          Length = 860

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/89 (56%), Positives = 64/89 (71%)
 Frame = -1

Query: 269 NRSKYVDFTMPFTELELGTLVKLDKGNGWFFFEPFDSNLWTVGACFFVGLGIVVWIIEHP 90
           NRS YVDFT+PFTE+ LG +V + + + W FF+P   +LW   A FFV  G++VW+IE  
Sbjct: 523 NRSTYVDFTLPFTEMGLG-IVAVKERSMWVFFQPLTPDLWITSAFFFVLTGVIVWLIERA 581

Query: 89  INEEFQGSVVKQIGTILWFSVSTLVYAHR 3
            N+EFQGS  +QIG +LWF  STLVYAHR
Sbjct: 582 ENKEFQGSWPQQIGVVLWFGFSTLVYAHR 610


>ref|XP_002877069.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
           gi|297322907|gb|EFH53328.1| ATGLR1.2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 864

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/89 (56%), Positives = 61/89 (68%)
 Frame = -1

Query: 269 NRSKYVDFTMPFTELELGTLVKLDKGNGWFFFEPFDSNLWTVGACFFVGLGIVVWIIEHP 90
           NRS YVDFT+PFTE+ LG +   ++   W FF+P   +LW   A FFV  GI+VW+IE  
Sbjct: 525 NRSTYVDFTLPFTEMGLGIVAATERSM-WVFFQPLTPDLWLTSAAFFVLTGIIVWLIERH 583

Query: 89  INEEFQGSVVKQIGTILWFSVSTLVYAHR 3
            N EFQGS  +QIG +LWF  STLVYAHR
Sbjct: 584 ENTEFQGSWSQQIGVVLWFGFSTLVYAHR 612


>ref|XP_002863895.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
           gi|297309730|gb|EFH40154.1| ATGLR1.2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 860

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/89 (56%), Positives = 62/89 (69%)
 Frame = -1

Query: 269 NRSKYVDFTMPFTELELGTLVKLDKGNGWFFFEPFDSNLWTVGACFFVGLGIVVWIIEHP 90
           +RS Y DFT+PFTE+ LG +V   + + W FF+P   NLW   A FFV  GI+VW+IE  
Sbjct: 521 DRSTYADFTLPFTEMGLG-IVAAKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWLIERA 579

Query: 89  INEEFQGSVVKQIGTILWFSVSTLVYAHR 3
            N+EFQGS  +QIG +LWF  STLVYAHR
Sbjct: 580 ENKEFQGSWPQQIGVVLWFGFSTLVYAHR 608


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