BLASTX nr result

ID: Lithospermum22_contig00022376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022376
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328788.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
gb|ABK94004.1| unknown [Populus trichocarpa]                           57   3e-06
ref|XP_002892016.1| hypothetical protein ARALYDRAFT_474862 [Arab...    56   7e-06

>ref|XP_002328788.1| predicted protein [Populus trichocarpa] gi|222839086|gb|EEE77437.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +2

Query: 143 MREISSKTRFHHLLVFLTSLAFHFISGLSDDSASSKDGT----DSASHGKKGSNAXXXXX 310
           M EIS  +R   LL+F  SL+  FISG+SDDS+ +K+GT     +AS    G        
Sbjct: 1   MSEISGGSR-SVLLLFFLSLSLLFISGISDDSSGAKNGTKADPHAASKNNDGPEIAIVFV 59

Query: 311 XXXXXXXXXXXXFKFWQKKKREEQYAQ 391
                       FKFWQKKKREEQYA+
Sbjct: 60  FVVAIGFFALFLFKFWQKKKREEQYAR 86


>gb|ABK94004.1| unknown [Populus trichocarpa]
          Length = 105

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
 Frame = +2

Query: 143 MREISSKTRFHHLLVFLTSLAFHFISGLSDDSASSKDGT----DSASHGKKGSNAXXXXX 310
           M EIS  +R   LL+F  SL+  FISG+SDDS+ +K+ T     +AS    G        
Sbjct: 1   MSEISGGSR-SVLLLFFLSLSLLFISGISDDSSGAKNRTKADPHAASKNNDGPEIAIVFV 59

Query: 311 XXXXXXXXXXXXFKFWQKKKREEQYAQ 391
                       FKFWQKKKREEQYA+
Sbjct: 60  FVVAIGFFALFLFKFWQKKKREEQYAR 86


>ref|XP_002892016.1| hypothetical protein ARALYDRAFT_474862 [Arabidopsis lyrata subsp.
           lyrata] gi|297337858|gb|EFH68275.1| hypothetical protein
           ARALYDRAFT_474862 [Arabidopsis lyrata subsp. lyrata]
          Length = 107

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
 Frame = +2

Query: 143 MREISSKT---RFHHLLVFLTSLAFHFISGLSDDSASSKDGTDSASH---GKKGSNAXXX 304
           MREIS  T    + HLL+F  S++ HF+ G+S DS SS  G  + SH   G  G+     
Sbjct: 1   MREISISTLTLSWSHLLLF-ASISLHFVLGISGDSNSSSTGAKAESHTSSGITGTKVILV 59

Query: 305 XXXXXXXXXXXXXXFKFWQKKKREEQYAQ 391
                         +K WQKKKR+EQYA+
Sbjct: 60  LLGFGAVAGVSFSLYKLWQKKKRDEQYAR 88


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