BLASTX nr result

ID: Lithospermum22_contig00022362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022362
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314102.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|NP_001119460.1| smr (Small MutS Related) domain-containing p...    97   6e-18
ref|NP_001119459.1| smr (Small MutS Related) domain-containing p...    97   6e-18
ref|NP_200680.1| smr (Small MutS Related) domain-containing prot...    97   6e-18
gb|AAM62636.1| putative PRL1 associated protein [Arabidopsis tha...    95   2e-17

>ref|XP_002314102.1| predicted protein [Populus trichocarpa] gi|222850510|gb|EEE88057.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  110 bits (275), Expect = 4e-22
 Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
 Frame = -3

Query: 445 LMDVFASCSIEEAEAAYTEANGDVNNAAQILVGLVACSEDKTTXXXXXXXXXXXXXXXXX 266
           LM+ F S S+EEAE AY EA GD+N AAQIL   +  SED +T                 
Sbjct: 50  LMEAFDSISVEEAEEAYREAKGDINKAAQILENFMENSEDPSTSSFSSGLSGFGLGSSSS 109

Query: 265 SLPDVFAGDD---CVGNELNPKG-----RAKKVIAAAGTVSSMLGKDYVRSTPLQNSSNV 110
           S     +        GN +N KG     + K+V+A  GTVS++LGK+YV+++P ++S   
Sbjct: 110 SSAGSSSASRDGFLEGNLVNRKGFRGGNKQKRVLAVTGTVSTVLGKEYVKASPRRDSMKA 169

Query: 109 KGYSENSLSKEDAEQFLSSMLGVDCELSLAVVQDVL 2
           K +    + KE+AEQFL SMLG DCELS+ VV+DVL
Sbjct: 170 KDFGNGVVEKEEAEQFLCSMLGNDCELSMGVVRDVL 205


>ref|NP_001119460.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|332009708|gb|AED97091.1| smr (Small MutS
           Related) domain-containing protein [Arabidopsis
           thaliana]
          Length = 506

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
 Frame = -3

Query: 451 KNLMDVFASCSIEEAEAAYTEANGDVNNAAQILVGLVACSEDKTTXXXXXXXXXXXXXXX 272
           ++LM+ F S S+EEA AAY EA GD+N AA+IL  LV   +D +T               
Sbjct: 55  ESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSDLVESGDDPSTSSVASGSSGQETAST 114

Query: 271 XXSLPDVFAG--DDCVGNELNPKGRAKKVIAAAGTVSSMLGKDYVRSTP-------LQNS 119
                   +   +D   +      +  +VIAA G VSS++ KDY++  P       ++ S
Sbjct: 115 SEYGAGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERS 174

Query: 118 SNVKGYSENSLSKEDAEQFLSSMLGVDCELSLAVVQDVL 2
             + G  + +  +E AEQFLSSMLG DCELS+AVV+DVL
Sbjct: 175 KELCGNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVL 213


>ref|NP_001119459.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|332009707|gb|AED97090.1| smr (Small MutS
           Related) domain-containing protein [Arabidopsis
           thaliana]
          Length = 471

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
 Frame = -3

Query: 451 KNLMDVFASCSIEEAEAAYTEANGDVNNAAQILVGLVACSEDKTTXXXXXXXXXXXXXXX 272
           ++LM+ F S S+EEA AAY EA GD+N AA+IL  LV   +D +T               
Sbjct: 55  ESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSDLVESGDDPSTSSVASGSSGQETAST 114

Query: 271 XXSLPDVFAG--DDCVGNELNPKGRAKKVIAAAGTVSSMLGKDYVRSTP-------LQNS 119
                   +   +D   +      +  +VIAA G VSS++ KDY++  P       ++ S
Sbjct: 115 SEYGAGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERS 174

Query: 118 SNVKGYSENSLSKEDAEQFLSSMLGVDCELSLAVVQDVL 2
             + G  + +  +E AEQFLSSMLG DCELS+AVV+DVL
Sbjct: 175 KELCGNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVL 213


>ref|NP_200680.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|3201477|emb|CAA06808.1| putative PRL1
           associated protein [Arabidopsis thaliana]
           gi|8843792|dbj|BAA97340.1| PRL1 associated protein-like
           [Arabidopsis thaliana] gi|17065352|gb|AAL32830.1| PRL1
           associated protein-like [Arabidopsis thaliana]
           gi|21387179|gb|AAM47993.1| PRL1-associated protein-like
           protein [Arabidopsis thaliana]
           gi|332009706|gb|AED97089.1| smr (Small MutS Related)
           domain-containing protein [Arabidopsis thaliana]
          Length = 519

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
 Frame = -3

Query: 451 KNLMDVFASCSIEEAEAAYTEANGDVNNAAQILVGLVACSEDKTTXXXXXXXXXXXXXXX 272
           ++LM+ F S S+EEA AAY EA GD+N AA+IL  LV   +D +T               
Sbjct: 55  ESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSDLVESGDDPSTSSVASGSSGQETAST 114

Query: 271 XXSLPDVFAG--DDCVGNELNPKGRAKKVIAAAGTVSSMLGKDYVRSTP-------LQNS 119
                   +   +D   +      +  +VIAA G VSS++ KDY++  P       ++ S
Sbjct: 115 SEYGAGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERS 174

Query: 118 SNVKGYSENSLSKEDAEQFLSSMLGVDCELSLAVVQDVL 2
             + G  + +  +E AEQFLSSMLG DCELS+AVV+DVL
Sbjct: 175 KELCGNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVL 213


>gb|AAM62636.1| putative PRL1 associated protein [Arabidopsis thaliana]
          Length = 519

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
 Frame = -3

Query: 451 KNLMDVFASCSIEEAEAAYTEANGDVNNAAQILVGLVACSEDKTTXXXXXXXXXXXXXXX 272
           ++LM+ F S S+EEA AAY EA GD+N AA+IL  LV   +D +T               
Sbjct: 55  ESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSDLVESGDDPSTSSVASGSSGQETAST 114

Query: 271 XXSLPDVFAG--DDCVGNELNPKGRAKKVIAAAGTVSSMLGKDYVRSTP-------LQNS 119
                   +   +D   +      +  +VIAA G VSS++ KDY++  P       ++ S
Sbjct: 115 SEYGAGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERS 174

Query: 118 SNVKGYSENSLSKEDAEQFLSSMLGVDCELSLAVVQDVL 2
             + G  + +  +E AEQFLSSMLG DCELS+A V+DVL
Sbjct: 175 KELCGNGKKAADREKAEQFLSSMLGDDCELSMAFVRDVL 213


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