BLASTX nr result

ID: Lithospermum22_contig00022360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022360
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002514853.1| hypothetical protein RCOM_1078540 [Ricinus c...    61   4e-07
ref|XP_003548542.1| PREDICTED: F-box/kelch-repeat protein At3g06...    60   9e-07
gb|ABX82527.1| S-locus F-box-like protein a [Petunia integrifoli...    58   3e-06
ref|XP_003615582.1| F-box/kelch-repeat protein [Medicago truncat...    57   8e-06

>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
 Frame = +2

Query: 116 LNFTKSRTRYLVYRQLKIIEIFRLSTGLWENITSAVPLIPIDSIEPTQQVQ-ADLNGIAH 292
           ++F KS+ R   + +   I ++ L+ G W  I    PL      +  Q+V  A LNG+ H
Sbjct: 163 VSFQKSKFRSENFPE---IALYSLNEGSWRGIRQTGPL----RYDTDQRVSSAFLNGVVH 215

Query: 293 W--FGLDRETQTVIKILSFDVHNEVFDTIDPPATVSKEKFRRGDFHPIYLFVFDESLFFI 466
           W  +  D+       +L FD+ +E+F  I  P+ ++  +        + L V+ ES   +
Sbjct: 216 WIAYRADQHEGVSNVVLGFDMSDEIFLEIALPSCLANVRPSC-----LSLMVYKESSISV 270

Query: 467 RHVFHMIGGEWKFEIWKMEEYGVVESWKLLRVHVFEPIYAAP--LGFNNNGQLIWFTYYH 640
                +     +F IW M+EYGVVESW  L + +       P  LG      L+      
Sbjct: 271 CQASFL--SSVQFHIWVMKEYGVVESWTKLVLTLAAQGEGVPRALGIRKEELLM-----E 323

Query: 641 GQQGFVSTNLDEDSFKFICNIETECNAPLCSYYLESLALLDKPFATS 781
            ++G++ +   E        I  E +      YLESL LLDK  ATS
Sbjct: 324 KKRGWIVSGDLESQLVRDLRIWGEPSRTFIGSYLESLVLLDKSNATS 370


>ref|XP_002514853.1| hypothetical protein RCOM_1078540 [Ricinus communis]
           gi|223545904|gb|EEF47407.1| hypothetical protein
           RCOM_1078540 [Ricinus communis]
          Length = 421

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
 Frame = +2

Query: 188 STGLWENITSAVPLIPIDSIEPTQQVQADLNGIAHWFGLDRETQTVIKILSFDVHNEVFD 367
           STG W  I + VP    +S  P     A  NG  HWF L        +I++FD  +E F 
Sbjct: 219 STGTWRRIEN-VPSFEQNSSRPFSNAFA--NGCFHWFFLR-------EIMTFDFESEKFK 268

Query: 368 TIDPPATVSKEKFRRGDFHPIYLFVFDESLFFIRHVFHMIGGEWKFEIWKMEEYGVVESW 547
           +I  P     E         I + V  +S+F  +HV    G E   EIW M+EYG VESW
Sbjct: 269 SIPLPHHDYDEDTW------INIGVLKDSIFISKHVDQGYGHE-AIEIWLMKEYGAVESW 321

Query: 548 KLLRVHV----------FEPIYAAPLGFNNNGQLI------WFTYYHGQQGFVSTNL 670
             +RVHV          FE  Y   + F  NG L+      W  Y+H  + +   ++
Sbjct: 322 --VRVHVLVKTTCLRGCFE--YLRIIKFFENGDLLLYNGMDWLLYHHEMKKYTRLHI 374


>ref|XP_003548542.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 400

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
 Frame = +2

Query: 173 EIFRLSTGLWENITSAVPLIPIDSIEPTQQVQADLNGIAHWFGLDRETQTVIK--ILSFD 346
           E++ L++  W  +  A   +PI+ I  + +V   +N   HW+G D +     +  +L+FD
Sbjct: 196 ELYSLNSNSWRKLDDASLPLPIE-IWGSSKVYTYVNNCCHWWGYDVDESGAKEDAVLAFD 254

Query: 347 VHNEVFDTIDPPATVSKEKFRRGDFHPIYLFVFDESLFFIRHVFHMIGGEWKFEIWKMEE 526
           + NE F  I  P      K       P+      ES      V+ + G E  F++W M++
Sbjct: 255 MVNESFRKIKVPRIRGSSKEEFATLAPL-----KESSTIAVVVYPLRGQEKSFDVWVMKD 309

Query: 527 YGVVESW-KLLRVHVFEPIYAAPLGFNNNGQLIWFTYYHGQQGFVSTNLDEDSFKF---- 691
           Y    SW K   V   E IY   +GF  + Q  W +   G  G V  + + +S K     
Sbjct: 310 YWNEGSWVKQYTVEPIETIYKF-VGFYGSNQFPWSS--SGNDGLVGCDYEPESEKIKDLQ 366

Query: 692 ICNIETECNAPLCSYYLESLALLDK 766
           +C       A   + Y+ESL  L +
Sbjct: 367 VCGKNGSLRA---ARYMESLVSLKR 388


>gb|ABX82527.1| S-locus F-box-like protein a [Petunia integrifolia subsp. inflata]
          Length = 384

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
 Frame = +2

Query: 170 IEIFRLSTGLWENITSAVPLIPIDSIEPTQQVQADLNGIAHWFGLDRETQTVIKILSFDV 349
           I+++ L+   W  +       P D   P   +    NG  HWFG  RET   + IL FD+
Sbjct: 187 IDVYELTIDSWRELDYIDLEWPFDYRYPYSDMF--YNGATHWFG-GRET---VVILCFDI 240

Query: 350 HNEVFDTID-PPATVSKEKFRRGDFHPIYLFVFDESLFFI--RHVFHMIGGEWKF-EIWK 517
             E F  +  P A   K++   G      L V ++SL  I  RH   +I     F EIW 
Sbjct: 241 STETFRNMKMPDACHFKDRKSYG------LVVLNDSLALICYRHPRCVIDPAKDFMEIWT 294

Query: 518 MEEYGVVESWKLLRVHVFEPI-YAAPLGFNNNGQLIWFTYYHGQQGFVSTNLDEDSFKFI 694
           M+EYGV ESW  ++ +   P+   +PL    N  L+    YH      S +L+ D  K +
Sbjct: 295 MKEYGVGESW--IKKYTITPLSIESPLAVWKNHFLL--LEYHRSGVLFSYDLNSDEVKEL 350

Query: 695 CNIETECNAPLCSYYLESLALLDK 766
            N+     +   S Y ESL L+ K
Sbjct: 351 -NLHGWPQSLRVSIYKESLTLIPK 373


>ref|XP_003615582.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516917|gb|AES98540.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 402

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 11/219 (5%)
 Frame = +2

Query: 131 SRTRYLVYRQLKIIEIFRLSTGLWENITSAVPLIPIDSIEPTQQVQA-DLNGIAHWFGLD 307
           +RT   V    + +++FR    +W  I S  P   +D++  +   Q   L+G  +W  + 
Sbjct: 192 TRTYNAVVLCSREVKVFRFGDNIWRKIVSFTPYNLLDTLGCSYVNQGVHLSGTVNWISIY 251

Query: 308 RETQTVIK--ILSFDVHNEVFDTIDPPATVSKEKFRRGDFHPIYLFVFDESLFFIRHVFH 481
            +  TV K  I+S D+  E +  + PP        R  +  P    + D   F   H F 
Sbjct: 252 LKDVTVEKFVIISLDLATETYRKLLPPPGAVNLVSRYTE--PTIAVLLDRLCF--SHHFK 307

Query: 482 MIGGEWKFEIWKMEEYGVVESW--------KLLRVHVFEPIYAAPLGFNNNGQLIWFTYY 637
               E  F IW+M E+GV +SW        + L+V  F   Y  P   + NG+ + F  Y
Sbjct: 308 ----ETHFVIWQMIEFGVEQSWTQFLKISFQNLQVDNFSEYYLFPFCLSENGETLIFASY 363

Query: 638 HGQQGFVSTNLDEDSFKFICNIETECNAPLCSYYLESLA 754
            G +  +         K I +  T C +     Y+ESLA
Sbjct: 364 VGHKAILYNLKTNRVKKAIGSAITWCYS---KDYVESLA 399


Top