BLASTX nr result

ID: Lithospermum22_contig00022354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022354
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265607.1| PREDICTED: arabinogalactan peptide 20 [Vitis...    60   1e-07
ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thalian...    57   2e-06
ref|NP_191723.1| arabinogalactan protein 20 [Arabidopsis thalian...    57   2e-06
ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Popu...    56   3e-06
ref|XP_002318371.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002265607.1| PREDICTED: arabinogalactan peptide 20 [Vitis vinifera]
           gi|147810314|emb|CAN66886.1| hypothetical protein
           VITISV_012134 [Vitis vinifera]
           gi|302143705|emb|CBI22566.3| unnamed protein product
           [Vitis vinifera]
          Length = 67

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = -2

Query: 385 MSININMTIGLFIFSAIFGLVFPSVNAQAFAPAPSPTSDGTTIDQFIACXXXXXXXXLTY 206
           M+++    + + I + ++ +V PS +AQ+ APAP+PTSDGT IDQ IAC        LTY
Sbjct: 1   MAVSRVSLVVVAIIALLYAVVLPSAHAQSLAPAPAPTSDGTAIDQGIACVLMLVALVLTY 60

Query: 205 IIH*LD 188
           +IH LD
Sbjct: 61  LIHPLD 66


>ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thaliana]
           gi|297828351|ref|XP_002882058.1| hypothetical protein
           ARALYDRAFT_483786 [Arabidopsis lyrata subsp. lyrata]
           gi|75100629|sp|O82337.1|AGP16_ARATH RecName:
           Full=Arabinogalactan peptide 16; Short=AG-peptide 16;
           Flags: Precursor gi|10880509|gb|AAG24284.1|AF195897_1
           arabinogalactan protein [Arabidopsis thaliana]
           gi|15294170|gb|AAK95262.1|AF410276_1 At2g46330/F11C10.2
           [Arabidopsis thaliana] gi|4559376|gb|AAD23036.1|
           expressed protein [Arabidopsis thaliana]
           gi|20197373|gb|AAM15047.1| expressed protein
           [Arabidopsis thaliana] gi|20453295|gb|AAM19886.1|
           At2g46330/F11C10.2 [Arabidopsis thaliana]
           gi|21553759|gb|AAM62852.1| unknown [Arabidopsis
           thaliana] gi|297327897|gb|EFH58317.1| hypothetical
           protein ARALYDRAFT_483786 [Arabidopsis lyrata subsp.
           lyrata] gi|330255586|gb|AEC10680.1| arabinogalactan
           protein 16 [Arabidopsis thaliana]
          Length = 73

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -2

Query: 370 NMTIGLFIFSAIFGLVFPSVNAQAFAPAPSPTSDGTTIDQFIACXXXXXXXXLTYIIH*L 191
           N   G  +FS +F ++     AQ+ APAP+PTSDGT+IDQ IA         LTY+IH L
Sbjct: 5   NSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIHPL 64

Query: 190 D 188
           D
Sbjct: 65  D 65


>ref|NP_191723.1| arabinogalactan protein 20 [Arabidopsis thaliana]
           gi|75183616|sp|Q9M373.1|AGP20_ARATH RecName:
           Full=Arabinogalactan peptide 20; Short=AG-peptide 20;
           Flags: Precursor gi|6850855|emb|CAB71094.1| putative
           protein [Arabidopsis thaliana]
           gi|21536871|gb|AAM61203.1| unknown [Arabidopsis
           thaliana] gi|98960995|gb|ABF58981.1| At3g61640
           [Arabidopsis thaliana] gi|332646714|gb|AEE80235.1|
           arabinogalactan protein 20 [Arabidopsis thaliana]
          Length = 74

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -2

Query: 370 NMTIGLFIFSAIFGLVFPSVNAQAFAPAPSPTSDGTTIDQFIACXXXXXXXXLTYIIH*L 191
           N    + +F+ +F ++ P   AQ+ APAPSPTSDGT+IDQ IA         LTY+IH L
Sbjct: 5   NSVAVIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIHPL 64

Query: 190 D 188
           D
Sbjct: 65  D 65


>ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa]
           gi|118483747|gb|ABK93766.1| unknown [Populus
           trichocarpa] gi|222861619|gb|EEE99161.1| hypothetical
           protein POPTRDRAFT_572354 [Populus trichocarpa]
          Length = 76

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = -2

Query: 355 LFIFSAIFGLVFPSVNAQAFAPAPSPTSDGTTIDQFIACXXXXXXXXLTYIIH*LD 188
           L + S I  +V PSV AQ+ APAP+PTSDGT+IDQ IA         LTY+IH LD
Sbjct: 14  LAVVSLILAVVSPSVEAQSPAPAPAPTSDGTSIDQGIAYLLMLVALVLTYLIHPLD 69


>ref|XP_002318371.1| predicted protein [Populus trichocarpa] gi|222859044|gb|EEE96591.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -2

Query: 370 NMTIGLF--IFSAIFGLVFPSVNAQAFAPAPSPTSDGTTIDQFIACXXXXXXXXLTYIIH 197
           N++ G+F  I + IF +  P  + Q+ APAPSPTSDG  IDQ +AC        LTY+IH
Sbjct: 5   NISFGVFAAIVAIIFAISMPLAHGQSSAPAPSPTSDGAAIDQGVACILMLVALVLTYLIH 64


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