BLASTX nr result

ID: Lithospermum22_contig00022344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022344
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   240   4e-61
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              240   4e-61
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   227   5e-57
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   227   5e-57
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   221   2e-55

>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  240 bits (613), Expect = 4e-61
 Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 6/262 (2%)
 Frame = -3

Query: 1124 ILDVNHLGKELYSLQQMNNLPTAISYLKKRSLLPMDIEIAYQALPDEVKIHGHNVLKISE 945
            +LDVNHL KE+  L+++ NL  A S LK+R  +P+D+EI +QA  +E KIHGHNVLKIS 
Sbjct: 256  VLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPIDMEIPHQA-SNEDKIHGHNVLKISH 314

Query: 944  LFAKLSTLQKSFPES-KGDKGQYSSTFESYIDIFSACSTS-EDPAIEDVGIWTKNKRKTS 771
            L A L ++ K  PE  + D G  +S  E Y +IF   ST+ EDP    + +WT + RK S
Sbjct: 315  LLANLCSILKITPEMIQSDGGHLASALEGYANIFHPHSTNTEDPIDGGIKVWTDDTRKVS 374

Query: 770  AENLVFLWGFGSGMTAGTLKEILSGSHEIFLQDFDVRLVDRSCAIVVFWNAGFSNKFXXX 591
            +E LVF+WGF   M+AG LK +L GSH +F ++FDVR+VD SCAIVVFW +G S  F   
Sbjct: 375  SEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTF-LE 433

Query: 590  XXXXXXXXXXXXEMIAEGLRATGYHTYQKACQLGLWEADLADSLEKALEKPEHLSEAHCQ 411
                        EM++EGLRA GY TY+ AC+LG WEADLADSL+KALE+P+H SEA  +
Sbjct: 434  AISSNWISGLLREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSE 493

Query: 410  ----GWSVIDWNSDDMIHLEDL 357
                G S I W+ D +I+L++L
Sbjct: 494  AKPTGPSQIYWSRDSIINLDEL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  240 bits (613), Expect = 4e-61
 Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 6/262 (2%)
 Frame = -3

Query: 1124 ILDVNHLGKELYSLQQMNNLPTAISYLKKRSLLPMDIEIAYQALPDEVKIHGHNVLKISE 945
            +LDVNHL KE+  L+++ NL  A S LK+R  +P+D+EI +QA  +E KIHGHNVLKIS 
Sbjct: 6199 VLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPIDMEIPHQA-SNEDKIHGHNVLKISH 6257

Query: 944  LFAKLSTLQKSFPES-KGDKGQYSSTFESYIDIFSACSTS-EDPAIEDVGIWTKNKRKTS 771
            L A L ++ K  PE  + D G  +S  E Y +IF   ST+ EDP    + +WT + RK S
Sbjct: 6258 LLANLCSILKITPEMIQSDGGHLASALEGYANIFHPHSTNTEDPIDGGIKVWTDDTRKVS 6317

Query: 770  AENLVFLWGFGSGMTAGTLKEILSGSHEIFLQDFDVRLVDRSCAIVVFWNAGFSNKFXXX 591
            +E LVF+WGF   M+AG LK +L GSH +F ++FDVR+VD SCAIVVFW +G S  F   
Sbjct: 6318 SEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTF-LE 6376

Query: 590  XXXXXXXXXXXXEMIAEGLRATGYHTYQKACQLGLWEADLADSLEKALEKPEHLSEAHCQ 411
                        EM++EGLRA GY TY+ AC+LG WEADLADSL+KALE+P+H SEA  +
Sbjct: 6377 AISSNWISGLLREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSE 6436

Query: 410  ----GWSVIDWNSDDMIHLEDL 357
                G S I W+ D +I+L++L
Sbjct: 6437 AKPTGPSQIYWSRDSIINLDEL 6458


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  227 bits (578), Expect = 5e-57
 Identities = 121/260 (46%), Positives = 165/260 (63%), Gaps = 10/260 (3%)
 Frame = -3

Query: 1124 ILDVNHLGKELYSLQQMNNLPTAISYLKKRSLLPMDIEIAYQALPDEVKIHGHNVLKISE 945
            ++DVNHL KE+  L+++ ++P AIS LK R   P+D+EI  QA+ +E  IHG NV+KI E
Sbjct: 372  VIDVNHLMKEISPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVKICE 431

Query: 944  LFAKLSTLQKSFPES-KGDKGQYSSTFESYIDIFSA-CSTSEDPAIEDVGIWTKNKRKTS 771
            LFA+L ++ K  P + K D+ + +S  E+Y +IFS  C+ SE+P   ++ IWT N R  S
Sbjct: 432  LFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTRTVS 491

Query: 770  AENLVFLWGFGSGMTAGTLKEILSGSHEIFLQDFDVRLVDRSCAIVVFWNAGFSNKFXXX 591
             E++VFLWGFG  +TAG LK +L  SHE F ++FDVRLVD SCAIV+FW  G +  F   
Sbjct: 492  CEDMVFLWGFGDRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNT 551

Query: 590  XXXXXXXXXXXXEMIAEGLRATGYHTYQKACQLGLWEADLADSLEKALEKPEHLSEA--- 420
                        EM++EGLRA GY TY +AC+LGLWE+ LADSL++AL   +  SEA   
Sbjct: 552  MNKCSDMRGPLREMVSEGLRAAGYETYNRACRLGLWESSLADSLDRALADSDCASEADSK 611

Query: 419  -----HCQGWSVIDWNSDDM 375
                  C  W +   N DD+
Sbjct: 612  TKCSDRCNEWII---NLDDL 628


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  227 bits (578), Expect = 5e-57
 Identities = 121/260 (46%), Positives = 165/260 (63%), Gaps = 10/260 (3%)
 Frame = -3

Query: 1124 ILDVNHLGKELYSLQQMNNLPTAISYLKKRSLLPMDIEIAYQALPDEVKIHGHNVLKISE 945
            ++DVNHL KE+  L+++ ++P AIS LK R   P+D+EI  QA+ +E  IHG NV+KI E
Sbjct: 370  VIDVNHLMKEISPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVKICE 429

Query: 944  LFAKLSTLQKSFPES-KGDKGQYSSTFESYIDIFSA-CSTSEDPAIEDVGIWTKNKRKTS 771
            LFA+L ++ K  P + K D+ + +S  E+Y +IFS  C+ SE+P   ++ IWT N R  S
Sbjct: 430  LFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTRTVS 489

Query: 770  AENLVFLWGFGSGMTAGTLKEILSGSHEIFLQDFDVRLVDRSCAIVVFWNAGFSNKFXXX 591
             E++VFLWGFG  +TAG LK +L  SHE F ++FDVRLVD SCAIV+FW  G +  F   
Sbjct: 490  CEDMVFLWGFGDRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNT 549

Query: 590  XXXXXXXXXXXXEMIAEGLRATGYHTYQKACQLGLWEADLADSLEKALEKPEHLSEA--- 420
                        EM++EGLRA GY TY +AC+LGLWE+ LADSL++AL   +  SEA   
Sbjct: 550  MNKCSDMRGPLREMVSEGLRAAGYETYNRACRLGLWESSLADSLDRALADSDCASEADSK 609

Query: 419  -----HCQGWSVIDWNSDDM 375
                  C  W +   N DD+
Sbjct: 610  TKCSDRCNEWII---NLDDL 626


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  221 bits (564), Expect = 2e-55
 Identities = 117/260 (45%), Positives = 166/260 (63%), Gaps = 3/260 (1%)
 Frame = -3

Query: 1127 KILDVNHLGKELYSLQQMNNLPTAISYLKKRSLLPMDIEIAYQALPDEVKIHGHNVLKIS 948
            +++DVNHL KE+  L+++ N+P A SYLK     P+D+EI + A+ +E KIHGHNV++I 
Sbjct: 365  QVIDVNHLMKEISPLKKVTNIPMATSYLKNWFFAPVDMEIPFPAMVNEGKIHGHNVMRIC 424

Query: 947  ELFAKLSTLQKSFPES-KGDKGQYSSTFESYIDIFSACSTS-EDPAIEDVGIWTKNKRKT 774
            +LFAKL  + K  P S + ++   +S  E+Y++IFS      ++P  EDV IWT N RK 
Sbjct: 425  QLFAKLCYILKLAPNSIQSNEKNLASAIEAYVNIFSPYFPGPQEPTDEDVRIWTNNTRKV 484

Query: 773  SAENLVFLWGFGSGMTAGTLKEILSGSHEIFLQDFDVRLVDRSCAIVVFWNAGFSNKFXX 594
            S ++LVFLWGF   M+AG LK +L  SH++F ++FDVR VD+SCAIVVFW  G SN    
Sbjct: 485  SCQDLVFLWGFRYRMSAGMLKSLLQQSHKVFSEEFDVRFVDKSCAIVVFWEPGLSNTLLD 544

Query: 593  XXXXXXXXXXXXXEMIAEGLRATGYHTYQKACQLGLWEADLADSLEKALEKPEHLSEA-H 417
                         EM++EG+RA  Y TY + C+LGLW  +LADSL+KAL   +H S++  
Sbjct: 545  VLKGSSEIVGPLREMVSEGVRAASYDTYNRVCRLGLWHENLADSLDKALADTDHPSDSDS 604

Query: 416  CQGWSVIDWNSDDMIHLEDL 357
                S   W  + MI+L++L
Sbjct: 605  VTSSSNTYWCHEWMINLDEL 624


Top