BLASTX nr result

ID: Lithospermum22_contig00022334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022334
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21098.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_004157124.1| PREDICTED: aberrant root formation protein 4...   306   5e-81
ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2...   293   7e-77
ref|XP_002873494.1| predicted protein [Arabidopsis lyrata subsp....   265   2e-68
ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis ...   261   3e-67

>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  372 bits (956), Expect = e-101
 Identities = 191/381 (50%), Positives = 259/381 (67%)
 Frame = -2

Query: 1144 NDSNPTLDRLHQTLASCYRLIEAGDFSKADQEILELVEFLNSLSESAVSDPENEEAETVA 965
            + +NP + RL Q L SC R IE GD  K+   + ELV +L+S+S++A+SD  NEE+   A
Sbjct: 11   SSANPLVLRLQQILTSCSRSIETGDLHKSGSSVSELVNYLDSISDAALSDTSNEESRNNA 70

Query: 964  FSVIYQVYHYIGLPELDQEVIDALSYQLPRAVARFTCVSRRCAEVAHDVIDRLIDLSNPR 785
              V+ +++ YI  P LDQ V+DALS++LP+AVA+F CVS +C E+   ++++ +   +PR
Sbjct: 71   LEVLSEIHLYICQPLLDQAVVDALSFELPKAVAKFACVSGKCLEIVESIVNQFVATCSPR 130

Query: 784  DMISILCEALGLASKMFMVPNYFVPLLGGIAKVLGSIRRHHFEQFKVAVPIILNVLKAIA 605
            D+I I CEAL + S M   PNY+ P L G++KV  SI R HFEQ K AVP+IL+VLKA+ 
Sbjct: 131  DLIPIFCEALDVPSGMSKAPNYYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMT 190

Query: 604  LDLDVEDIDCEDLFNKTIDIAHSIQAINVKLEGEDGKQSSALFSLFILETMYLVTIGMRN 425
             +LD ED + EDLF + I IA+SIQ +  KL G   ++  AL  LF+L+ M L+   MR 
Sbjct: 191  SELDDEDTNSEDLFARAISIANSIQTVCGKLAGRLNEKLRALLGLFVLQIMSLLC--MRE 248

Query: 424  KASSCASLVLQLSHFLRLCNLSYVGLIMERDIDTITKIALRDDGDYQTGCFSHVKHGSAL 245
            K SSC +LVLQLSHFL  C LSY+GL+   D+DTI  I L++DGD    CF +VKHG++L
Sbjct: 249  KVSSCLTLVLQLSHFLPYCGLSYLGLLTGCDVDTIIDIVLKEDGDDYISCFPYVKHGASL 308

Query: 244  AVIWGFKSDEIAMAAEADFTVIRRELQSDQTKRWQAVGKMKYIFISTAIPWELKKFAINF 65
            AVI G  S+ +A +AE D TV++  LQS+QTKRWQAVG +K+IF S  +PWELKK  INF
Sbjct: 309  AVICGHMSNMVAQSAEEDLTVLKDALQSNQTKRWQAVGMLKHIFSSANLPWELKKHTINF 368

Query: 64   ILAILDGNSHHISQDKYEDYS 2
            +L I+DGN      D+  D S
Sbjct: 369  LLWIMDGNLSEKCNDEVSDCS 389


>ref|XP_004157124.1| PREDICTED: aberrant root formation protein 4-like [Cucumis sativus]
          Length = 611

 Score =  306 bits (785), Expect = 5e-81
 Identities = 158/381 (41%), Positives = 244/381 (64%), Gaps = 1/381 (0%)
 Frame = -2

Query: 1144 NDSNPTLDRLHQTLASCYRLIEAGDFSKADQEILELVEFLNSLSESAVSDPENEEAETVA 965
            +D  P++ RL + LA+C +  E  D  +++  + ELV +L+ +SE+A ++ +N + E+ A
Sbjct: 19   SDDRPSVLRLRELLAACSKSTENEDTHQSEALVSELVNYLDCISEAAETELDNGDTESDA 78

Query: 964  FSVIYQVYHYIGLPELDQEVIDALSYQLPRAVARFTCVSRRCAEVAHDVIDRLIDLSNPR 785
              V+ ++Y +I  P LDQ  ID LS+ LP+AV++F  V   C E+   +IDR + L +PR
Sbjct: 79   SEVLNEIYQFISSPSLDQGTIDTLSFDLPKAVSKFIRVGG-CLEIVDSIIDRFVTLCSPR 137

Query: 784  DMISILCEALGLASKMFMVPNYFVPLLGGIAKVLGSIRRHHFEQFKVAVPIILNVLKAIA 605
            DM+S+LCEAL L +      N   P L G++KV+ SI+R HFEQ KVAVP++LN LKA+ 
Sbjct: 138  DMLSVLCEALDLQTTN--ATNCAAPFLSGLSKVIRSIQRRHFEQIKVAVPVVLNALKAVD 195

Query: 604  LDLDVEDIDCEDLFNKTIDIAHSIQAINVKL-EGEDGKQSSALFSLFILETMYLVTIGMR 428
             +    D++C+ L+ + +DIA SIQ++ VKL +G+  ++  +L  L++L+ M L ++ M 
Sbjct: 196  FETSEGDVNCDTLYARAMDIASSIQSVCVKLVDGKVQEKLQSLLGLYVLQIMALFSVSMS 255

Query: 427  NKASSCASLVLQLSHFLRLCNLSYVGLIMERDIDTITKIALRDDGDYQTGCFSHVKHGSA 248
            ++ SSC   + +LS FL  C LSY GLI   DID I+K  + +D D  T CFS++KHG+ 
Sbjct: 256  HEVSSCLPFISKLSSFLPFCGLSYAGLITGFDIDKISKNIIGEDEDDYTACFSYIKHGAC 315

Query: 247  LAVIWGFKSDEIAMAAEADFTVIRRELQSDQTKRWQAVGKMKYIFISTAIPWELKKFAIN 68
            L+V+WGF S+E+  AA+    V++ EL S QT+RW+A+G  ++I    A+ W+LKK AI+
Sbjct: 316  LSVLWGFISEEVVQAADEKLNVLKDELTSKQTERWKAIGMFRHILSFPALSWKLKKHAID 375

Query: 67   FILAILDGNSHHISQDKYEDY 5
            F+L I   N      DK  DY
Sbjct: 376  FLLCI---NGSESFDDKESDY 393


>ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1|
            predicted protein [Populus trichocarpa]
          Length = 568

 Score =  293 bits (749), Expect = 7e-77
 Identities = 153/352 (43%), Positives = 227/352 (64%)
 Frame = -2

Query: 1057 DQEILELVEFLNSLSESAVSDPENEEAETVAFSVIYQVYHYIGLPELDQEVIDALSYQLP 878
            ++ + ELV+F++S+S+SAVS+ E+ + +  A  V+ + + ++  P LDQ VIDALS++LP
Sbjct: 1    EKSVAELVDFIDSVSDSAVSNHEDSDEQGNAVEVLSETHKFLLSPSLDQAVIDALSFELP 60

Query: 877  RAVARFTCVSRRCAEVAHDVIDRLIDLSNPRDMISILCEALGLASKMFMVPNYFVPLLGG 698
            +AV++F  +S  C  +A  +ID  I+  +PRDM+ ILCEAL   + M    ++  PLL G
Sbjct: 61   KAVSKFAGLSNECLRIADSIIDFFIENCSPRDMLPILCEALDSWNGMVHAYDFVAPLLSG 120

Query: 697  IAKVLGSIRRHHFEQFKVAVPIILNVLKAIALDLDVEDIDCEDLFNKTIDIAHSIQAINV 518
            I+KVL +I+R HFEQ KVAVP+ILNVLKA+  +    D +C +LF + + IA SI+AI  
Sbjct: 121  ISKVLLAIQRRHFEQVKVAVPVILNVLKAVCSEFSARDTECMNLFIRALGIADSIRAICA 180

Query: 517  KLEGEDGKQSSALFSLFILETMYLVTIGMRNKASSCASLVLQLSHFLRLCNLSYVGLIME 338
            KLEG   ++   + S +IL+ M L+++ +  +   C  LV +LS F   C LSY+GLI  
Sbjct: 181  KLEGRVLEKLRDVLSSYILQIMALLSLVLGCEIPRCLPLVSRLSEFFPFCGLSYLGLITG 240

Query: 337  RDIDTITKIALRDDGDYQTGCFSHVKHGSALAVIWGFKSDEIAMAAEADFTVIRRELQSD 158
             D+D +T+  +    D    C S++KHG+A++VIWG  S  +A AA  D + ++ E+ S+
Sbjct: 241  SDVDEMTRTFVAGKEDDYMRCLSYIKHGAAISVIWGHISVNVARAAGGDVSTVKDEILSN 300

Query: 157  QTKRWQAVGKMKYIFISTAIPWELKKFAINFILAILDGNSHHISQDKYEDYS 2
            QT+RWQAVG +KYIF     PWELKK AI+F+L I DGN      D+  D S
Sbjct: 301  QTERWQAVGMLKYIFSFVDFPWELKKHAIDFLLCITDGNIARNCNDEDTDCS 352


>ref|XP_002873494.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319331|gb|EFH49753.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  265 bits (677), Expect = 2e-68
 Identities = 147/375 (39%), Positives = 229/375 (61%), Gaps = 5/375 (1%)
 Frame = -2

Query: 1120 RLHQTLASCYRL---IEAGDFSKADQEILELVEFLNSLSESAVSDPENEEAETVAFSVIY 950
            R+ + LA C+     +EAG F + +  + ELV  LNSL E+ V +  ++E E     V+ 
Sbjct: 9    RVRELLALCFSFFQSVEAGGFRELESLVTELVNCLNSLYENVVLNA-SDELENDVIEVLD 67

Query: 949  QVYHYIGLPELDQEVIDALSYQLPRAVARFTCVSRRCAEVAHDVIDRLIDLSNPRDMISI 770
            ++   +  P++DQ+VIDALS+ LPR  ++F  +S RC ++  +++DR ++  NPRDM+SI
Sbjct: 68   EILKVLSSPQVDQDVIDALSFHLPRVTSKFADLSSRCLQLVEEIVDRFVEACNPRDMLSI 127

Query: 769  LCEALGLASKMFMVPNYFVPLLGGIAKVLGSIRRHHFEQFKVAVPIILNVLKAIALDLDV 590
            LCEAL  A       +   PLL G++KV  SI+R H+EQ KVAVPI+LNVLK I+L+ DV
Sbjct: 128  LCEALDAARCSLSPSSCSTPLLHGLSKVFISIQRRHYEQLKVAVPIVLNVLKDISLETDV 187

Query: 589  EDIDCEDLFNKTIDIAHSIQAINVKLEGEDGKQSSALFSLFILETMYLVTIGMRNKASSC 410
            +    E LF+K + IA SI+ ++ KL  E+  +   L  L++++   ++++ +R+KA+SC
Sbjct: 188  Q---VEGLFDKALGIASSIRDVSSKLNNEEEAKVRCLLGLYVIQITAILSVSIRDKAASC 244

Query: 409  ASLVLQLSHFLRLCNLSYVGLIMERDIDTI-TKIALRDDGDYQTGCFSHVKHGSALAVIW 233
              LV+QL  FL  C L+++GLI   D + + + +A+ DD D+ T  F  +  G++  +IW
Sbjct: 245  IPLVIQLEPFLTYCGLTHLGLITGNDTEKLMSTVAIDDDDDFGTS-FPDINLGASFLLIW 303

Query: 232  GFKSDEIAMAAEADFTVIRRELQSDQTKRWQAVGKMKYIFISTAIPWELKKFAINFILAI 53
               S E+A AA A       ELQS+  KRWQ  G +KYI  S  + WE K+ AI F+L I
Sbjct: 304  AKISHEVAEAANAALGSDVDELQSNPVKRWQVYGMLKYILSSVDLLWEFKRHAIEFLLDI 363

Query: 52   LDG-NSHHISQDKYE 11
             +G  S H + ++ +
Sbjct: 364  TEGVTSSHCNDEQID 378


>ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis thaliana]
            gi|28416705|gb|AAO42883.1| At5g11030 [Arabidopsis
            thaliana] gi|110743215|dbj|BAE99498.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332004242|gb|AED91625.1| Aberrant root formation
            protein 4 [Arabidopsis thaliana]
          Length = 578

 Score =  261 bits (666), Expect = 3e-67
 Identities = 145/374 (38%), Positives = 220/374 (58%), Gaps = 1/374 (0%)
 Frame = -2

Query: 1120 RLHQTLASCYRLIE-AGDFSKADQEILELVEFLNSLSESAVSDPENEEAETVAFSVIYQV 944
            R+ + LA C+  +E AG F   +  + ELV  L+SL E+   D  NE    V   V+ ++
Sbjct: 21   RVRELLALCFSSVEEAGGFQDFESFVTELVSCLDSLYENVALDANNELENDVIEEVLDEI 80

Query: 943  YHYIGLPELDQEVIDALSYQLPRAVARFTCVSRRCAEVAHDVIDRLIDLSNPRDMISILC 764
               +  P++DQ+VIDALS+ LP+  ++F  +S RC ++  +++DR ++  NPRDM+SILC
Sbjct: 81   LKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILC 140

Query: 763  EALGLASKMFMVPNYFVPLLGGIAKVLGSIRRHHFEQFKVAVPIILNVLKAIALDLDVED 584
            EAL  A           PLL G++KV   I+R H+EQ KVAVPI+LNVLK I+L+ DV+ 
Sbjct: 141  EALDAARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQ- 199

Query: 583  IDCEDLFNKTIDIAHSIQAINVKLEGEDGKQSSALFSLFILETMYLVTIGMRNKASSCAS 404
               EDLF+K + IA SI+ ++ KL  E+  +   L  L++++   ++++ +R+KA+SC  
Sbjct: 200  --VEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDKAASCIP 257

Query: 403  LVLQLSHFLRLCNLSYVGLIMERDIDTITKIALRDDGDYQTGCFSHVKHGSALAVIWGFK 224
            LV+QL  FL  C L+++GLI   D + +      DD ++ T  F  +  G++L  I    
Sbjct: 258  LVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVAGDDDEFITS-FPDISLGASLLFICAKI 316

Query: 223  SDEIAMAAEADFTVIRRELQSDQTKRWQAVGKMKYIFISTAIPWELKKFAINFILAILDG 44
            S E+A AA A    +  ELQ++  KRWQA G +KYI  S  + WE K+ AI F+L I  G
Sbjct: 317  SHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIEFLLDITKG 376

Query: 43   NSHHISQDKYEDYS 2
             +     D+  D S
Sbjct: 377  VTSSQCNDEQIDCS 390


Top