BLASTX nr result

ID: Lithospermum22_contig00022277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022277
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308298.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-14
ref|XP_002281896.1| PREDICTED: uncharacterized protein LOC100247...    77   6e-12
ref|XP_002279406.1| PREDICTED: uncharacterized protein LOC100249...    67   8e-09
emb|CAN72576.1| hypothetical protein VITISV_004233 [Vitis vinifera]    67   8e-09
ref|XP_002324174.1| predicted protein [Populus trichocarpa] gi|2...    66   2e-08

>ref|XP_002308298.1| predicted protein [Populus trichocarpa] gi|222854274|gb|EEE91821.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
 Frame = -1

Query: 690 QQNRLVNEENDPVHFFRVASFLERVKSINFSRSYHAE-HEEITQHAXXXXXXXXXXXXXX 514
           Q+     +E+DP    R  S LERVKSINFS  Y++   EE TQ                
Sbjct: 112 QEPENTTQEHDPPQLERAPSLLERVKSINFSSLYYSSGPEETTQR----LPAQTRSDADP 167

Query: 513 XXXXXXGHVARTTSDTIXXXXXXXXXXXXXXXXSAKIVGVVEEREG---GRQRPATMRET 343
                  HV R  S+ +                 A  + + EE E     R+RPAT R +
Sbjct: 168 VSHDHDHHVKRIQSEHMVRATKRQVKMKKSASEKAVSLDLAEEVEREKVERRRPATTRAS 227

Query: 342 KGKV---NGMVTFSEDEAVDAKADDFINRFKQQLKLQRIESLLKYR 214
           +  V   +  V    DE VDAKADDFINRFKQQLKLQR+ESLL+Y+
Sbjct: 228 EKTVMIGDEEVDAKADEEVDAKADDFINRFKQQLKLQRLESLLRYK 273


>ref|XP_002281896.1| PREDICTED: uncharacterized protein LOC100247359 [Vitis vinifera]
          Length = 260

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 36/55 (65%), Positives = 47/55 (85%)
 Frame = -1

Query: 369 QRPATMRETKGKVNGMVTFSEDEAVDAKADDFINRFKQQLKLQRIESLLKYRGAS 205
           +RP T+RETK K++  ++F +DE VDAKADDFINRFKQQLKLQR++SLL+Y  +S
Sbjct: 206 RRPQTVRETKSKLSETMSFGDDEEVDAKADDFINRFKQQLKLQRLDSLLRYSRSS 260


>ref|XP_002279406.1| PREDICTED: uncharacterized protein LOC100249297 [Vitis vinifera]
          Length = 249

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -1

Query: 369 QRPATMRETKGKVNGMVTFSEDEAVDAKADDFINRFKQQLKLQRIESLLKYR 214
           +RPAT+RE K K        +DE VDAKADDFIN+FKQQLKLQR++S+++Y+
Sbjct: 189 RRPATVREGKAKATVAEGDEDDEEVDAKADDFINKFKQQLKLQRLDSIIRYK 240



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = -1

Query: 807 WATISSWFTPTIFFCLLNLMVATIYILSSMKSNKNNQEHQQNRLVNEENDPVHFFRVASF 628
           WA+++SWFTP + F LLNLM+ TI++ S + + +    HQQ R  +++  P    R  S 
Sbjct: 12  WASMNSWFTPAVLFLLLNLMIGTIFVTSGLGTQR---PHQQPRDSSQDPQP-QLPRSPSV 67

Query: 627 LERVKSINF 601
           L+R+KSINF
Sbjct: 68  LQRLKSINF 76


>emb|CAN72576.1| hypothetical protein VITISV_004233 [Vitis vinifera]
          Length = 306

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -1

Query: 369 QRPATMRETKGKVNGMVTFSEDEAVDAKADDFINRFKQQLKLQRIESLLKYR 214
           +RPAT+RE K K        +DE VDAKADDFIN+FKQQLKLQR++S+++Y+
Sbjct: 175 RRPATVREGKAKATVAEGDEDDEEVDAKADDFINKFKQQLKLQRLDSIIRYK 226


>ref|XP_002324174.1| predicted protein [Populus trichocarpa] gi|222865608|gb|EEF02739.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
 Frame = -1

Query: 807 WATISSWFTPTIFFCLLNLMVATIYILSSMKSNKNNQEHQ-QNRLVNEEN-------DPV 652
           WA++SSWFTPT+ F LLNLM+ TI+I SS+ ++K + +HQ Q R V  +N          
Sbjct: 9   WASMSSWFTPTVLFVLLNLMIGTIFITSSIATHKPSDQHQEQERHVQAQNGHGLGLGHGH 68

Query: 651 HFFRVASFLERVKSINF 601
              R  S L+R+KSINF
Sbjct: 69  QLARSPSVLQRLKSINF 85



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = -1

Query: 369 QRPATMRETKGKVNGMVTFSEDEAVDAKADDFINRFKQQLKLQRIESLLKYR 214
           +RPAT++E K       T  +D  VDAKADDFINRFKQQLKLQR+ S++KY+
Sbjct: 262 RRPATVKEGKTS-----TEFDDTEVDAKADDFINRFKQQLKLQRMNSIMKYK 308


Top