BLASTX nr result

ID: Lithospermum22_contig00022272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022272
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   103   3e-20
gb|ACF74325.1| unknown [Arachis hypogaea]                             101   1e-19
ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago t...   100   2e-19
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   100   3e-19
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...    99   9e-19

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  103 bits (257), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 57/70 (81%)
 Frame = +3

Query: 3   LSRDTNETILKNAFEAYGEVIETKVICDHTSSESKGYGFVRFTSETEASNALKEMHGQLL 182
           LS DTNETILK+AF  YGE+IE KVICDH S +SKGYGFV+FTS+ +A  ALKEM GQ L
Sbjct: 36  LSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSL 95

Query: 183 DGRKIRVKYA 212
           DGR IRV YA
Sbjct: 96  DGRNIRVTYA 105


>gb|ACF74325.1| unknown [Arachis hypogaea]
          Length = 112

 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = +3

Query: 3   LSRDTNETILKNAFEAYGEVIETKVICDHTSSESKGYGFVRFTSETEASNALKEMHGQLL 182
           LS DTNET+L++AFE +GE+IE KVICDH + +SKGYGFVRFT+ET A+   KEMH +++
Sbjct: 39  LSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRFTTETSAATGRKEMHKKII 98

Query: 183 DGRKIRVKYA 212
           DGR+IRV YA
Sbjct: 99  DGRRIRVCYA 108


>ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 112

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/70 (64%), Positives = 59/70 (84%)
 Frame = +3

Query: 3   LSRDTNETILKNAFEAYGEVIETKVICDHTSSESKGYGFVRFTSETEASNALKEMHGQLL 182
           LS +TNET+L++ FE +G++IE KVIC+H + ESKGYGFVRF SET A+ A KE+HGQ++
Sbjct: 40  LSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATARKELHGQIV 99

Query: 183 DGRKIRVKYA 212
           DGR+IRV YA
Sbjct: 100 DGRRIRVGYA 109


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/70 (67%), Positives = 58/70 (82%)
 Frame = +3

Query: 3   LSRDTNETILKNAFEAYGEVIETKVICDHTSSESKGYGFVRFTSETEASNALKEMHGQLL 182
           LS DTNE IL++AF  +GE+IE KVICDH + +S+GYGFVRF SET A+ A KEM+GQ+L
Sbjct: 65  LSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQIL 124

Query: 183 DGRKIRVKYA 212
           DGR+IRV YA
Sbjct: 125 DGRRIRVSYA 134


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 49/73 (67%), Positives = 56/73 (76%)
 Frame = +3

Query: 3   LSRDTNETILKNAFEAYGEVIETKVICDHTSSESKGYGFVRFTSETEASNALKEMHGQLL 182
           LS DTNE +LKN FE YGEVIE KVICDH S +SKGYGFV F SE  A++AL  M+ QLL
Sbjct: 33  LSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDSEEAAASALASMNNQLL 92

Query: 183 DGRKIRVKYALNK 221
           +GR IRV+YA  K
Sbjct: 93  EGRNIRVEYAQPK 105


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