BLASTX nr result

ID: Lithospermum22_contig00022244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022244
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT33043.1| RAV transcription factor [Camellia sinensis]            65   7e-09
ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...    61   8e-08
gb|AFH57270.1| RAV [Gossypium hirsutum]                                57   2e-06

>gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
          Length = 362

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -3

Query: 448 LVQPVQVVRLFGVNIFKAPHQVVMESVDVSCSGKRSREMELLAMECIKK 302
           +VQPVQ+VRLFGVNIFK P   +   +D +C GKR REMELLA+EC KK
Sbjct: 310 VVQPVQMVRLFGVNIFKVP---ISGGLDSNCGGKRMREMELLALECSKK 355


>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 371

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -3

Query: 445 VQPVQVVRLFGVNIFKAPHQVVMESVDVSCSGKRSREMELLAMECIKK 302
           VQPVQ+VRLFGVNIFK P    +E     C+GKR REMELL+++CIKK
Sbjct: 321 VQPVQMVRLFGVNIFKVPGNSHIE----GCNGKRIREMELLSLDCIKK 364


>gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = -3

Query: 448 LVQPVQVVRLFGVNIFKAPHQVVMESVDVS--CSGKRSREMELLAMECIKK 302
           L  PVQ+VRLFGVNIFK P     E+V ++  C+GKR+REMELL +EC KK
Sbjct: 303 LENPVQMVRLFGVNIFKMPGS---ENVGLAGGCNGKRTREMELLELECSKK 350


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