BLASTX nr result

ID: Lithospermum22_contig00022217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022217
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]    62   2e-17
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]    61   5e-17
emb|CAB75932.1| putative protein [Arabidopsis thaliana]                59   3e-16
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...    62   1e-15
emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]    59   1e-15

>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score = 62.0 bits (149), Expect(2) = 2e-17
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   YFLGIEVRETKIGIFICQKKYAEDVLKRFHMSDCNPVICPMVHGTIINKDVEG 161
           YFLGIEV ++  GIFI QKKY  ++L RF M DCNP   P   G  +NKD  G
Sbjct: 526 YFLGIEVVQSDTGIFISQKKYVREILNRFQMKDCNPXSTPTQFGLKLNKDHGG 578



 Score = 52.0 bits (123), Expect(2) = 2e-17
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = +2

Query: 167 IDEIYYKQIIGSLMYLINTRPDMIFSMSVLSRFMSRP 277
           +D I YKQI+GSLMYL  TRPD++ S+S++SR+M  P
Sbjct: 581 VDNIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENP 617


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score = 61.2 bits (147), Expect(2) = 5e-17
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   YFLGIEVRETKIGIFICQKKYAEDVLKRFHMSDCNPVICPMVHGTIINKDVEG 161
           YFLGIEV +   GIFI Q+KYA++VL+RF++  CNPV  P+V G  + +D EG
Sbjct: 807 YFLGIEVMQKTDGIFINQRKYAQEVLERFNLYQCNPVHNPVVPGFKLTRDKEG 859



 Score = 51.2 bits (121), Expect(2) = 5e-17
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +2

Query: 167 IDEIYYKQIIGSLMYLINTRPDMIFSMSVLSRFMSRP 277
           +D   YKQ++GSLMYL  TRPD++FS+S++SR+M  P
Sbjct: 862 VDGTLYKQMVGSLMYLTATRPDLMFSVSLISRYMEHP 898


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score = 59.3 bits (142), Expect(2) = 3e-16
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +3

Query: 3    YFLGIEVRETKIGIFICQKKYAEDVLKRFHMSDCNPVICPMVHGTIINKDVEG 161
            +FLGIEV+++  GIFICQ++YA +VL RF M + N V  P+V GT + KD  G
Sbjct: 1055 HFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENG 1107



 Score = 50.4 bits (119), Expect(2) = 3e-16
 Identities = 20/37 (54%), Positives = 30/37 (81%)
 Frame = +2

Query: 167  IDEIYYKQIIGSLMYLINTRPDMIFSMSVLSRFMSRP 277
            +DE  +KQ++GSLMYL  TRPD+++ + ++SRFMS P
Sbjct: 1110 VDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNP 1146


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = +3

Query: 3   YFLGIEVRETKIGIFICQKKYAEDVLKRFHMSDCNPVICPMVHGTIINKDVEG 161
           Y+LG+EV++T+ GIF+ Q++Y ++VLK+F+M DCNPV  PM  G  ++K  EG
Sbjct: 757 YYLGMEVKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGGLKLSKFDEG 809



 Score = 45.4 bits (106), Expect(2) = 1e-15
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +2

Query: 167 IDEIYYKQIIGSLMYLINTRPDMIFSMSVLSRFMSRP 277
           +D   +K ++GSL YL NTRPD+++++ V+ RFM  P
Sbjct: 812 VDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAP 848


>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score = 58.9 bits (141), Expect(2) = 1e-15
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = +3

Query: 3   YFLGIEVRETKIGIFICQKKYAEDVLKRFHMSDCNPVICPMVHGTIINKDVEGT**MKST 182
           +F GIEV +   GIFICQ++YA +VLKRF M D  PV  P+V G  ++KD +G     +T
Sbjct: 776 FFXGIEVLQKSDGIFICQRRYATEVLKRFGMFDSKPVSSPIVPGFKMSKDDDGV--AVNT 833

Query: 183 TN 188
           TN
Sbjct: 834 TN 835



 Score = 48.5 bits (114), Expect(2) = 1e-15
 Identities = 19/32 (59%), Positives = 30/32 (93%)
 Frame = +2

Query: 182 YKQIIGSLMYLINTRPDMIFSMSVLSRFMSRP 277
           +KQ++GSLMYL  TRPD++FS+S++SR+M++P
Sbjct: 836 FKQMVGSLMYLTATRPDIMFSVSLISRYMAKP 867


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