BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022190
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...    57   4e-07
ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 ...    54   7e-07
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    54   2e-06
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    54   2e-06
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    56   4e-06

>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
 Frame = +2

Query: 125  LFFSQKKYIKELLNKHGMLNCSTVK--MPATLKTDLNHDS*IHDPYRVPTI------LSI 280
            L   Q+KY+ +LL KH ML+   V   +P + K  L+  + ++D     ++      L+ 
Sbjct: 1191 LHLMQRKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAF 1250

Query: 281  TRPDLTYAVNLASQFMQASTTXXXXXXXXXXXXXXGTTTHGLTLST 418
            TRPD+ +AVN  SQFM   T+              GTTTHG+ L++
Sbjct: 1251 TRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNS 1296



 Score = 22.3 bits (46), Expect(2) = 4e-07
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 84   HYFLGIEVHRYGVPFSFLKR 143
            HYFLGIE  R       ++R
Sbjct: 1177 HYFLGIEATRTNTGLHLMQR 1196


>ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 [Sorghum bicolor]
           gi|241946957|gb|EES20102.1| hypothetical protein
           SORBIDRAFT_0010s008890 [Sorghum bicolor]
          Length = 1017

 Score = 54.3 bits (129), Expect(2) = 7e-07
 Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
 Frame = +2

Query: 128 FFSQKKYIKELLNKHGMLNCSTVKMPATLKTDL-NHDS*IHDPYRVPTI------LSITR 286
           F SQ KY +ELL + GM+NC     P   K  L +  + + DP    +I      L+ITR
Sbjct: 625 FLSQTKYAEELLERAGMVNCKPAATPIDTKAKLPSSGAAVQDPSEYRSIAGALQYLTITR 684

Query: 287 PDLTYAVNLASQFMQASTTXXXXXXXXXXXXXXGTTTHGLTLSTV 421
           PD+ YAV  A   M                   GTT+HGL L  V
Sbjct: 685 PDIAYAVQQACLHMHDPRDCHFAILKRIQRYVRGTTSHGLHLHGV 729



 Score = 23.9 bits (50), Expect(2) = 7e-07
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 84  HYFLGIEVHRYGVPF 128
           H+FLG++V R G  F
Sbjct: 610 HFFLGVDVRRCGTDF 624


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
 Frame = +2

Query: 125  LFFSQKKYIKELLNKHGMLNCSTVKMPATLKTDLNHDS*IHDPYRVPTI----------L 274
            LF SQ+KY  +LL   GM +CS+  MP  L+ DL   +  + P+  PT           L
Sbjct: 1161 LFLSQEKYTSDLLVNAGMSDCSS--MPTPLQLDLLQGN--NKPFPEPTYFRRLAGKLQYL 1216

Query: 275  SITRPDLTYAVNLASQFMQASTTXXXXXXXXXXXXXXGTTTHGLTLST 418
            ++TRPD+ +AVN   Q M A T               GT T G+ LS+
Sbjct: 1217 TLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSS 1264



 Score = 21.9 bits (45), Expect(2) = 2e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 84   HYFLGIEVH 110
            HYFLGI+ H
Sbjct: 1147 HYFLGIQAH 1155


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
 Frame = +2

Query: 125  LFFSQKKYIKELLNKHGMLNCSTVKMPATLKTDLNHDS*IHDPYRVPTI----------L 274
            LF SQ+KY  +LL   GM +CS+  MP  L+ DL   +  + P+  PT           L
Sbjct: 1038 LFLSQEKYTSDLLVNAGMSDCSS--MPTPLQLDLLQGN--NKPFPEPTYFRRLAGKLQYL 1093

Query: 275  SITRPDLTYAVNLASQFMQASTTXXXXXXXXXXXXXXGTTTHGLTLST 418
            ++TRPD+ +AVN   Q M A T               GT T G+ LS+
Sbjct: 1094 TLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSS 1141



 Score = 21.9 bits (45), Expect(2) = 2e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 84   HYFLGIEVH 110
            HYFLGI+ H
Sbjct: 1024 HYFLGIQAH 1032


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
 Frame = +2

Query: 125  LFFSQKKYIKELLNKHGMLNCSTV--KMPATLKTDLNHDS*IHDPYRVPTI------LSI 280
            L   Q+KYIK+LL KH M +   V   +P + K  L+  + ++D     ++      L+ 
Sbjct: 1206 LHLMQRKYIKDLLAKHNMADAKPVLTPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAF 1265

Query: 281  TRPDLTYAVNLASQFMQASTTXXXXXXXXXXXXXXGTTTHGLTLST 418
            TRPD+ YAVN  SQ M   T               GT+THG+ L T
Sbjct: 1266 TRPDIAYAVNRLSQLMPQPTEDHWQAAKRVLRYLAGTSTHGIFLDT 1311