BLASTX nr result

ID: Lithospermum22_contig00022155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022155
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529018.1| PREDICTED: methyl-CpG-binding domain-contain...    68   7e-10
ref|XP_003547028.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    67   1e-09
ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyr...    65   6e-09
ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycin...    64   1e-08
ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsi...    64   2e-08

>ref|XP_003529018.1| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Glycine max]
          Length = 251

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +2

Query: 248 TRSHPFRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSLVSVERYIRGE 403
           T SH FRLP GW +E  PR++ P  +D+YY EPGTRR+FRSL+SV+R++ GE
Sbjct: 38  TSSH-FRLPDGWVVEERPRASNPSHVDRYYYEPGTRRQFRSLLSVKRHLTGE 88


>ref|XP_003547028.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 7-like [Glycine max]
          Length = 250

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +2

Query: 248 TRSHPFRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSLVSVERYIRGE 403
           T SH FRLP GW +E  PR++ P    KYY EPGTRRKFRSL+SV+R++ GE
Sbjct: 26  TSSH-FRLPDGWVLEXRPRASNPSHFXKYYYEPGTRRKFRSLLSVQRHLAGE 76


>ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyrata subsp. lyrata]
           gi|297312186|gb|EFH42610.1| methyl-CpG-binding domain 7
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = +2

Query: 254 SHPFRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSLVSVERYIRGEDEVPFTKSKS 433
           S  FRLPRGW +E VPR    Y IDKYY+E  T ++FRSLVSVERY+R  +    T  + 
Sbjct: 113 SKGFRLPRGWSVEEVPRKNSHY-IDKYYVERKTGKRFRSLVSVERYLR--ESGNRTDQQL 169

Query: 434 LTLSHRRTSYRRMIISNGRMVK 499
           + L +RR   +   + +G +V+
Sbjct: 170 ILLQNRRGHSKDFSLPDGWIVE 191



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
 Frame = +2

Query: 200 RSGGSTTELALVPAAATRSHP--FRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSL 373
           R  G+ T+  L+     R H   F LP GW +E  PR    + ID+ YIEPGT  KFRS+
Sbjct: 159 RESGNRTDQQLILLQNRRGHSKDFSLPDGWIVEEKPRRNSSH-IDRSYIEPGTGNKFRSM 217

Query: 374 VSVERYIRGEDE--VPFTKSKSLTLSHRRTSYR 466
            +VERY++  +   V    S+ L L   R+  R
Sbjct: 218 AAVERYLQAVENSTVDMVHSERLALLMNRSGTR 250


>ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycine max]
           gi|255634513|gb|ACU17620.1| unknown [Glycine max]
          Length = 261

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +2

Query: 263 FRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSLVSVERYIRGE 403
           FRLP GW +E  PR ++  + DKYY EPGT RKFRSL+SV+R++ GE
Sbjct: 41  FRLPDGWVVEKKPRPSHESRFDKYYYEPGTGRKFRSLLSVQRHLAGE 87


>ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsis thaliana]
           gi|75171028|sp|Q9FJF4.1|MBD7_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 7;
           Short=AtMBD7; Short=MBD07; AltName:
           Full=Methyl-CpG-binding protein MBD7
           gi|9757900|dbj|BAB08347.1| unnamed protein product
           [Arabidopsis thaliana] gi|50198785|gb|AAT70426.1|
           At5g59800 [Arabidopsis thaliana]
           gi|53828603|gb|AAU94411.1| At5g59800 [Arabidopsis
           thaliana] gi|332009852|gb|AED97235.1| methyl-CPG-binding
           domain 7 protein [Arabidopsis thaliana]
          Length = 306

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 36/48 (75%)
 Frame = +2

Query: 254 SHPFRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRSLVSVERYIR 397
           S  FRLPRGW +E VPR    Y IDKYY+E  T ++FRSLVSVERY+R
Sbjct: 111 SKGFRLPRGWSVEEVPRKNSHY-IDKYYVERKTGKRFRSLVSVERYLR 157



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +2

Query: 191 IEERSGGSTTELALVPAAATRSHPFRLPRGWKIEGVPRSTYPYQIDKYYIEPGTRRKFRS 370
           + E       +L ++      S  FRLP GW +E  PR +  + ID+ YIEPGT  KFRS
Sbjct: 156 LRESRNSIEQQLRVLQNRRGHSKDFRLPDGWIVEEKPRRSSSH-IDRSYIEPGTGNKFRS 214

Query: 371 LVSVERYIRGE-----DEVPFTKSKSLTLSHRRTSYR 466
           + +VERY+        D V    S+ L L   R   R
Sbjct: 215 MAAVERYLISVGNITLDSVSMVHSERLPLLMNRNGIR 251


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