BLASTX nr result

ID: Lithospermum22_contig00022119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022119
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532473.1| protein with unknown function [Ricinus commu...   185   1e-44
ref|XP_003612411.1| Ring finger protein [Medicago truncatula] gi...   181   2e-43
ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like ...   180   4e-43
ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]                178   1e-42

>ref|XP_002532473.1| protein with unknown function [Ricinus communis]
           gi|223527798|gb|EEF29897.1| protein with unknown
           function [Ricinus communis]
          Length = 204

 Score =  185 bits (469), Expect = 1e-44
 Identities = 89/167 (53%), Positives = 108/167 (64%)
 Frame = +1

Query: 205 LTSSNVAQVPEPPQEMTDKADFVVILASLICAIICVLGLIVVARCTWLRHGVPRNILEHH 384
           LT  +   V +PP+ +  ++DFVVILA+L+CA+ICV+GLI VARC WLRH    +    H
Sbjct: 8   LTGFDSTPVADPPESVNVESDFVVILAALLCALICVVGLIAVARCAWLRHSGSASSSPSH 67

Query: 385 SSANKGLKKKVLNALPKYTYXXXXXXXXXKKTIDLKEDVVGRIEETNEEAEDCAICLTEY 564
           ++ANKGLKKK+L +LPK+TY           T                   +CAICL E+
Sbjct: 68  AAANKGLKKKILQSLPKFTYGSAAGSCKFAST-------------------ECAICLGEF 108

Query: 565 EDGDEIRVLPQCGHGFHVQCIDMWLGSHSSCPSCRQILEVTRCRKCG 705
             GDE+RVLPQCGHGFHV CID WLGSHSSCPSCRQIL V RC  CG
Sbjct: 109 AQGDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVVARCHTCG 155


>ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
           gi|355513746|gb|AES95369.1| Ring finger protein
           [Medicago truncatula] gi|388496508|gb|AFK36320.1|
           unknown [Medicago truncatula]
          Length = 215

 Score =  181 bits (459), Expect = 2e-43
 Identities = 92/174 (52%), Positives = 110/174 (63%)
 Frame = +1

Query: 184 RFLLGTNLTSSNVAQVPEPPQEMTDKADFVVILASLICAIICVLGLIVVARCTWLRHGVP 363
           R LL    T + V   P PP+ +  ++DFVVILA+L+CA+ICV+GLI VARC WLR    
Sbjct: 6   RILLSMETTPTTVVVAP-PPEAVAIESDFVVILAALLCALICVVGLIAVARCAWLRRDSG 64

Query: 364 RNILEHHSSANKGLKKKVLNALPKYTYXXXXXXXXXKKTIDLKEDVVGRIEETNEEAEDC 543
                  + ANKGLKKKVL +LPK++Y           T                   +C
Sbjct: 65  AGNSPQQALANKGLKKKVLQSLPKFSYVDSNPGKWLATT-------------------EC 105

Query: 544 AICLTEYEDGDEIRVLPQCGHGFHVQCIDMWLGSHSSCPSCRQILEVTRCRKCG 705
           AICL+++  GDEIRVLPQCGHGFHV CID WLGSHSSCPSCRQIL VTRC+KCG
Sbjct: 106 AICLSDFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILAVTRCQKCG 159


>ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
          Length = 223

 Score =  180 bits (457), Expect = 4e-43
 Identities = 89/172 (51%), Positives = 111/172 (64%)
 Frame = +1

Query: 190 LLGTNLTSSNVAQVPEPPQEMTDKADFVVILASLICAIICVLGLIVVARCTWLRHGVPRN 369
           +LG+   ++++A V  PP+ +  ++DFVVILA+L+CA+ICV+GL+ VARC W R G    
Sbjct: 7   ILGSADNATSLAAVAAPPEAVALESDFVVILAALLCALICVVGLVAVARCAWFRQGSGGG 66

Query: 370 ILEHHSSANKGLKKKVLNALPKYTYXXXXXXXXXKKTIDLKEDVVGRIEETNEEAEDCAI 549
                + ANKGLKKKVL +LPK+ Y                   V           +CAI
Sbjct: 67  SSPRQALANKGLKKKVLQSLPKFAY-------------------VDSNPSKWVATSECAI 107

Query: 550 CLTEYEDGDEIRVLPQCGHGFHVQCIDMWLGSHSSCPSCRQILEVTRCRKCG 705
           CL ++  GDEIRVLPQCGHGFHV CID WLGSHSSCPSCRQIL VTRC+KCG
Sbjct: 108 CLADFAAGDEIRVLPQCGHGFHVPCIDTWLGSHSSCPSCRQILAVTRCQKCG 159


>ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|222843629|gb|EEE81176.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  179 bits (455), Expect = 6e-43
 Identities = 99/182 (54%), Positives = 113/182 (62%), Gaps = 6/182 (3%)
 Frame = +1

Query: 178 ARRFLLGTNLTSSNVAQVPEPPQ-EMTDKADFVVILASLICAIICVLGLIVVARCTWLRH 354
           AR F     + +S+      PPQ   T  +DF+VILA+L+CA+ICVLGLI VARC WLR 
Sbjct: 2   ARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLRR 61

Query: 355 GVPRNILEH-----HSSANKGLKKKVLNALPKYTYXXXXXXXXXKKTIDLKEDVVGRIEE 519
              RN          S ANKGLKKKVL +LPK T+                ED  G++  
Sbjct: 62  FSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTF---------------SEDFSGKLP- 105

Query: 520 TNEEAEDCAICLTEYEDGDEIRVLPQCGHGFHVQCIDMWLGSHSSCPSCRQILEVTRCRK 699
                 DCAICLTE+  GDEIRVLPQCGHGFHV CID WLGSHSSCPSCRQIL V RC+K
Sbjct: 106 ------DCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCQK 159

Query: 700 CG 705
           CG
Sbjct: 160 CG 161


>gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
          Length = 170

 Score =  178 bits (452), Expect = 1e-42
 Identities = 92/155 (59%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
 Frame = +1

Query: 250 MTDKADFVVILASLICAIICVLGLIVVARCTWLRHGVPRN-ILEHHSSANKGLKKKVLNA 426
           +T ++DFVVILA+L+CA+ICV+GLI VARC WLR G+    I     SANKGLKKKVL +
Sbjct: 2   VTVESDFVVILAALLCALICVVGLIAVARCAWLRRGIGAGGIGGSQPSANKGLKKKVLQS 61

Query: 427 LPKYTYXXXXXXXXXKKTIDLKEDVVGRIEETNEEAEDCAICLTEYEDGDEIRVLPQCGH 606
           LPK+TY           T +                  CAICL EY  GDEIRVLPQCGH
Sbjct: 62  LPKFTYDPSSTANGAAFTAE------------------CAICLAEYAVGDEIRVLPQCGH 103

Query: 607 GFHVQCIDMWLGSHSSCPSCRQILEVTRCRKCGEV 711
            FH+QCID WLGSHSSCPSCRQIL VTRCRKCGE+
Sbjct: 104 IFHLQCIDTWLGSHSSCPSCRQILVVTRCRKCGEL 138


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