BLASTX nr result

ID: Lithospermum22_contig00022066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022066
         (1611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   376   e-102
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   374   e-101
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   362   2e-97
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...   305   2e-80
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   300   7e-79

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  376 bits (966), Expect = e-102
 Identities = 186/411 (45%), Positives = 265/411 (64%), Gaps = 4/411 (0%)
 Frame = -2

Query: 1526 MDFYIKENCKKQKINHSDDHQQQEIVFQRLPRELFMDIVSRLPTDSLIQFRFVCKTFQNI 1347
            MD   ++  K+ +         +    +RLPR++ +DI+SRLP  SL+QFRFVC+ ++ +
Sbjct: 1    MDLDFEKPGKRARYEMGGGEGPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLM 60

Query: 1346 TYDRDLIQIHLAKSHQ--PCLILHCDYPLNNQLYFVEFP-DHDSKQSLKRIQTPFSTDMP 1176
              D  L   HL ++ Q  PCLILHCDYP+ NQ+ FV+   +   K  ++++  PF   MP
Sbjct: 61   AQDSLLASKHLCRTAQYNPCLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMP 120

Query: 1175 EFSVVGSCDGILCLVNSLFNDPICVYNPFTRQYRELPKSVEFPNQEVMYGFGCHPVSKDC 996
            EF VVGSC+G+LCL +SLF D + V+NPFTR +++LPKS+++P+QEV++GFG HP+++  
Sbjct: 121  EFEVVGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVY 180

Query: 995  KIIKIIYLITPQTVVXXXXXXXXXRFMQSEVQVFSLGGQEWKSIAAIPYQLDHLSGVASL 816
            K++K++Y    +               QSEVQV +LG   W+S+  + YQLD     A +
Sbjct: 181  KVVKVVYY---RNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALV 237

Query: 815  NGRIHWVDHHAVF-RGLIVSFDFSDEEFREIRMPERNEQFTRSDYHLAVLRGCLSVAIPI 639
            NGR+HWV     +    IVSFD +DE+FREI  P+     +R +YHL VL GCLS A+  
Sbjct: 238  NGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGG-LSRCNYHLLVLGGCLSAAVH- 295

Query: 638  SARLGGGLDIWIMKEYGVKESWVKHYKVGTYIPKLISQEISQAHGIWRNVLDTRSVRVLC 459
              R  G L++W+MKEY VKESW+K + +G ++PK + Q++++ H IWRN    R VR+LC
Sbjct: 296  --RSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLC 353

Query: 458  LQDNGDILLEYKGGTLASYNPEEGTFKDVAFPGMPRLFQTTVHVSSLNWIE 306
            L  NG+ILLEYKG  L SYNPE G FKD+   G+P  FQT VHV SL+WI+
Sbjct: 354  LLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWID 404


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  374 bits (960), Expect = e-101
 Identities = 187/413 (45%), Positives = 273/413 (66%), Gaps = 6/413 (1%)
 Frame = -2

Query: 1526 MDFYIKENCKKQKINHSDDHQQQEIVFQRLPRELFMDIVSRLPTDSLIQFRFVCKTFQNI 1347
            MD   + + K++K    DD Q   +  + LPRE+  DI+SRLP  SL++F+ VC+ ++ +
Sbjct: 1    MDLDFERHSKRRKTKLEDDPQTTGM--ELLPREIAQDILSRLPITSLVKFKCVCRAWRAM 58

Query: 1346 TYDRDLIQIHLAKSHQ---PCLILHCDYPLNNQLYFVEFPDHDS-KQSLKRIQTPFSTDM 1179
              D +++ ++L+ S Q   PC+ILHCD+P+ N LYFV+F  H+  K+ +KRI+ PFS+ M
Sbjct: 59   ALDPEVVNLYLSCSTQETDPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMM 118

Query: 1178 PEFSVVGSCDGILCLVNSLFNDPICVYNPFTRQYRELPKSVEFPNQEVMYGFGCHPVSKD 999
            PEF VVGSC+G+LCL +SLFND + +YNPFT +Y+ELPKS+++P+QEV++GFG +P + +
Sbjct: 119  PEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNE 178

Query: 998  CKIIKIIYLITPQTVVXXXXXXXXXRFMQSEVQVFSLGGQEWKSIAAIPYQLDHLSGVAS 819
             K+I+I+Y                  +  S+VQ+ +LG   W+S+  + Y+L   +    
Sbjct: 179  YKVIRIVYYRNGH---GRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASETL 235

Query: 818  LNGRIHWVDHHAVFRGL--IVSFDFSDEEFREIRMPERNEQFTRSDYHLAVLRGCLSVAI 645
            +NGR+HWV      +    +VSFD +DE+FRE+  P+      R DYHLAVLRGCLSVA+
Sbjct: 236  VNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGG-LNRCDYHLAVLRGCLSVAV 294

Query: 644  PISARLGGGLDIWIMKEYGVKESWVKHYKVGTYIPKLISQEISQAHGIWRNVLDTRSVRV 465
              +    G L+IW+MKEY VKESWVK Y +G Y+PK + Q + +   IW+N  + R+VR 
Sbjct: 295  YCNY---GRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRA 351

Query: 464  LCLQDNGDILLEYKGGTLASYNPEEGTFKDVAFPGMPRLFQTTVHVSSLNWIE 306
            LC+  NG+ILLEYK   L SY+P++G FKD+   G P+ FQT VHV SLNWI+
Sbjct: 352  LCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWID 404


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  362 bits (929), Expect = 2e-97
 Identities = 187/414 (45%), Positives = 265/414 (64%), Gaps = 7/414 (1%)
 Frame = -2

Query: 1526 MDFYIKENCKKQKINHSDDHQQQEIVFQRLPRELFMDIVSRLPTDSLIQFRFVCKTFQNI 1347
            MD   +++ K++K     D Q   +  + LPRE+  DI+SRLP  SL+QF+ VC+ ++ +
Sbjct: 1    MDLDCEKHRKRRKTKVEYDPQTTGM--ELLPREIAHDILSRLPITSLVQFKCVCRAWRAL 58

Query: 1346 TYDRDLIQIHLAKSHQ----PCLILHCDYPLNNQLYFVEFPDHDS-KQSLKRIQTPFSTD 1182
              D  L+ ++L+ S Q    PCLILHCD+P+ N LYFV+F  H+  K+ +KRI  PFS+ 
Sbjct: 59   VQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSM 118

Query: 1181 MPEFSVVGSCDGILCLVNSLFNDPICVYNPFTRQYRELPKSVEFPNQEVMYGFGCHPVSK 1002
            MPEF VVGSC+G+LCL +SL+ND + +YNPFT  Y+ELPKS+++P+QEV+ GFG +P +K
Sbjct: 119  MPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTK 178

Query: 1001 DCKIIKIIYLITPQTVVXXXXXXXXXRFMQSEVQVFSLGGQEWKSIAAIPYQLDHLSGVA 822
            + K+I+I+Y                  +  SEVQ+ +LG  EW+S+  + Y+L   +  A
Sbjct: 179  EYKVIRIVYYRNGH---GGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASGA 235

Query: 821  SLNGRIHWVDHHAVFRGL--IVSFDFSDEEFREIRMPERNEQFTRSDYHLAVLRGCLSVA 648
             +NGR+HW+      +    +VSFD +DE+FRE+  P+      R +YHL VLRGCLS A
Sbjct: 236  LVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGG-LNRCNYHLVVLRGCLSAA 294

Query: 647  IPISARLGGGLDIWIMKEYGVKESWVKHYKVGTYIPKLISQEISQAHGIWRNVLDTRSVR 468
            +  +    G L+IW+MKEY VKESWVK Y +G Y+PK + Q   +   IW+N  + R V 
Sbjct: 295  VYCNY---GRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVG 351

Query: 467  VLCLQDNGDILLEYKGGTLASYNPEEGTFKDVAFPGMPRLFQTTVHVSSLNWIE 306
             LC+  NG+ILLEYK   L SY+P+ G FKD+   G P  FQT VHV SLNWI+
Sbjct: 352  ALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWID 405


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
            gi|449519392|ref|XP_004166719.1| PREDICTED: F-box protein
            At3g07870-like [Cucumis sativus]
          Length = 375

 Score =  305 bits (782), Expect = 2e-80
 Identities = 171/383 (44%), Positives = 231/383 (60%), Gaps = 5/383 (1%)
 Frame = -2

Query: 1439 LPRELFMDIVSRLPTDSLIQFRFVCKTFQNITYDRDLIQIHLAKSHQPCLILHCDYPLNN 1260
            LP ++   I+SRLP  SLIQF  V ++ + +     L   +    H  CLI H D+P+ N
Sbjct: 4    LPHDVLFQILSRLPISSLIQFHSVSRSCRLLAQYTQLFDPN--HDHFRCLIFHSDFPIRN 61

Query: 1259 QLYFVEFPD-HDSKQSLKRIQTPFSTDMPEFSVVGSCDGILCLVNSLFNDPICVYNPFTR 1083
             LYFV+FP     K S+KRI TPF+  MPE+ VVGSC+G LCL +SL+N+ + +YNPFTR
Sbjct: 62   HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNENLFIYNPFTR 121

Query: 1082 QYRELPKSVEFPNQEVMYGFGCHPVSKDCKIIKIIYLITPQTVVXXXXXXXXXRFMQSEV 903
             Y ELPKS +F N +V+YG G HP +K  KI+KI+Y                 RF  SEV
Sbjct: 122  DYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVY--------SKGFRRIQRRFHHSEV 173

Query: 902  QVFSLGGQEWKSIAAIPYQLDHLSGVASLNGRIHWVD---HHAVFRGLIVSFDFSDEEFR 732
            QVF+LG   W+SI  I + L      A++NGR+HWV     H V R  IVSFD + EEF 
Sbjct: 174  QVFTLGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYVGR-TIVSFDLASEEFI 232

Query: 731  EIRMPERNEQFTRSDYHLAVLRGCLSVAIPISARLGGGLDIWIMKEYGVKESWVKHYKVG 552
            +I  P+     +R ++ L  L  CLS  +  S    G ++IW+M++YGVKESWVK + +G
Sbjct: 233  DIPKPDYG-SLSRCNFQLMNLNDCLSAVVYCSY---GKMEIWVMEQYGVKESWVKSFNIG 288

Query: 551  TYIPKLISQE-ISQAHGIWRNVLDTRSVRVLCLQDNGDILLEYKGGTLASYNPEEGTFKD 375
            +Y+PK + QE       + + V+  R VRV+C+  +G+ILLEY+   L  +NP  G FKD
Sbjct: 289  SYMPKGLKQEGTEMCFKVSKIVVKGRIVRVVCVLKSGEILLEYRNRALVVFNPSSGKFKD 348

Query: 374  VAFPGMPRLFQTTVHVSSLNWIE 306
            V+F GMP  FQT VH  SLN I+
Sbjct: 349  VSFEGMPNWFQTIVHFGSLNRID 371


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  300 bits (768), Expect = 7e-79
 Identities = 158/413 (38%), Positives = 245/413 (59%), Gaps = 11/413 (2%)
 Frame = -2

Query: 1511 KENCKKQKINHSDDHQQQEIVFQRLPRELFMDIVSRLPTDSLIQFRFVCKTFQNITYDRD 1332
            +++ KK+KI    D        + LP ++  DI SRLP  S+ +  FVC++++++     
Sbjct: 4    EKSFKKRKITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHG 63

Query: 1331 LIQIHLAKSHQPCLILHCDYPLNNQLYFVEFPDHDSKQSLKRIQTPFSTDMPEFSVVGSC 1152
             +    +   +PCL+LHCD P+ N L+F++  + + +   K+    F++ MPEF VVGSC
Sbjct: 64   RLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSC 123

Query: 1151 DGILCLVNSLFNDPICVYNPFTRQYRELPK-SVEFPNQEVMYGFGCHPVSKDCKIIKIIY 975
            +G+LCL +SL+ND + +YNPFT    ELP+ S ++ +QE+++GFG H ++K+ K++KI+Y
Sbjct: 124  NGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVY 183

Query: 974  LI-TPQTVVXXXXXXXXXRFMQSEVQVFSLGGQ------EWKSIAAIPYQLDHLSGVASL 816
               +              ++ QSEVQ+ +L  +       W+S+   PY+    S  A +
Sbjct: 184  FRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALV 243

Query: 815  NGRIHWVDH---HAVFRGLIVSFDFSDEEFREIRMPERNEQFTRSDYHLAVLRGCLSVAI 645
            NGR+H+V     H   R   VSFD  DEEF+EI  P+      R+++ L  L+GCL   +
Sbjct: 244  NGRLHFVTRPRRHVPDRKF-VSFDLEDEEFKEIPKPDCGG-LNRTNHRLVNLKGCLCAVV 301

Query: 644  PISARLGGGLDIWIMKEYGVKESWVKHYKVGTYIPKLISQEISQAHGIWRNVLDTRSVRV 465
              +    G LDIW+MK YGVKESW K Y +GTY+PK + Q + +   IW+N  + + VRV
Sbjct: 302  YGNY---GKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRV 358

Query: 464  LCLQDNGDILLEYKGGTLASYNPEEGTFKDVAFPGMPRLFQTTVHVSSLNWIE 306
            LCL +NG+ILLEYK   L +Y+P+ G FKD+ F G+P  F T VH  +L+W +
Sbjct: 359  LCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFD 411


Top