BLASTX nr result

ID: Lithospermum22_contig00022062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022062
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...   125   3e-27
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...   125   4e-27
ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...   125   5e-27
dbj|BAF49724.1| centromeric histone H3-like protein-4 [Cardamine...   117   1e-24
dbj|BAF49723.1| centromeric histone H3-like protein-3 [Cardamine...   116   2e-24

>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/90 (70%), Positives = 71/90 (78%)
 Frame = -2

Query: 341 REIRKFQKTVHLLIPAAPFIRLVKEISNFYAPNINRWXXXXXXXXXXXXEDYLVALFNES 162
           REIR+FQKT  LLIPAAPFIRLVKEIS+F+AP + RW            ED+LV LF++S
Sbjct: 67  REIRRFQKTWDLLIPAAPFIRLVKEISHFFAPEVTRWQAEALIALQEAAEDFLVHLFDDS 126

Query: 161 MLCAIHAKRVTLMRKDFELARRLGGKGRVW 72
           MLCAIHAKRVTLM+KDFELARRLGGK R W
Sbjct: 127 MLCAIHAKRVTLMKKDFELARRLGGKARPW 156


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/90 (70%), Positives = 71/90 (78%)
 Frame = -2

Query: 341 REIRKFQKTVHLLIPAAPFIRLVKEISNFYAPNINRWXXXXXXXXXXXXEDYLVALFNES 162
           REIR+FQKT +LLIPAAPFIRLVKEIS F+AP + RW            ED+LV LF++S
Sbjct: 68  REIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALIALQEAAEDFLVHLFDDS 127

Query: 161 MLCAIHAKRVTLMRKDFELARRLGGKGRVW 72
           MLCAIHAKRVTLM+KDFELARRLGGK R W
Sbjct: 128 MLCAIHAKRVTLMKKDFELARRLGGKARPW 157


>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -2

Query: 341 REIRKFQKTVHLLIPAAPFIRLVKEISNFYAPNINRWXXXXXXXXXXXXEDYLVALFNES 162
           REIR+FQKT HLLIPAAPFIR V+EIS F+AP I+RW            EDYLV LF ++
Sbjct: 67  REIRRFQKTTHLLIPAAPFIRTVREISYFFAPEISRWTAEALVALQEAAEDYLVHLFEDA 126

Query: 161 MLCAIHAKRVTLMRKDFELARRLGGKGRVW 72
           MLCAIHAKRVTLM+KD+ELARR+GGKG+ W
Sbjct: 127 MLCAIHAKRVTLMKKDWELARRIGGKGQPW 156


>dbj|BAF49724.1| centromeric histone H3-like protein-4 [Cardamine flexuosa]
          Length = 172

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/91 (67%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 341 REIRKFQKTVHLLIPAAPFIRLVKEISNFYAP-NINRWXXXXXXXXXXXXEDYLVALFNE 165
           REIR FQK+ +LLIPAA FIR V+ I+  YAP  INRW            EDYLV LF++
Sbjct: 82  REIRHFQKSTNLLIPAASFIRQVRSITQMYAPPQINRWTAEALVALQEAAEDYLVGLFSD 141

Query: 164 SMLCAIHAKRVTLMRKDFELARRLGGKGRVW 72
           SMLCAIHA+RVTLMRKDFELARRLGGKGR W
Sbjct: 142 SMLCAIHARRVTLMRKDFELARRLGGKGRPW 172


>dbj|BAF49723.1| centromeric histone H3-like protein-3 [Cardamine flexuosa]
          Length = 175

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 341 REIRKFQKTVHLLIPAAPFIRLVKEISNFYAP-NINRWXXXXXXXXXXXXEDYLVALFNE 165
           REIR FQK+ +LLIPAA FIR V+ I+  YAP  INRW            EDYL+ LF++
Sbjct: 85  REIRHFQKSTNLLIPAASFIRQVRSITQMYAPPQINRWTAEALVALQEAAEDYLIGLFSD 144

Query: 164 SMLCAIHAKRVTLMRKDFELARRLGGKGRVW 72
           SMLCAIHA+RVTLMRKDFELARRLGGKGR W
Sbjct: 145 SMLCAIHARRVTLMRKDFELARRLGGKGRPW 175


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