BLASTX nr result

ID: Lithospermum22_contig00022044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00022044
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   148   5e-34
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   136   2e-30
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   120   9e-26
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   120   9e-26

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/130 (57%), Positives = 97/130 (74%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 AGWQAVSFASNTDMNSDGPAGAHIFDSEEKTDLNLNDDGSLPFYIIDAYEEYYGTNAGNI 204
           A WQA+  A +  +N +  + A + ++EEKTD  L+ DGSLPF+I+DA+EE YGTNAGNI
Sbjct: 337 AEWQALRNAGSGILNCN-ESEAKLVNTEEKTDFELDSDGSLPFFILDAHEELYGTNAGNI 395

Query: 203 YLFGKVKTGGAGGKFHSCCVIVKNMQRCVYAIPRGHVFDNSSLIQPDRDSEE---SPASF 33
           YLFGKVK   AGG +HSCC++VKNMQRCVYA+P G VF   ++ +  RD EE   SP++F
Sbjct: 396 YLFGKVK---AGGTYHSCCIVVKNMQRCVYAVPNGSVFCGDTISKLSRDVEESQISPSAF 452

Query: 32  QAQLHEMASG 3
            +QLHEMASG
Sbjct: 453 LSQLHEMASG 462


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/130 (51%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 AGWQAVSFASNTDMNSDGPAGAHIFDSEEKTDLNLNDDGSLPFYIIDAYEEYYGTNAGNI 204
           AGWQAV    N     +G       + EEK D  L+ DGSLPFYI+DA+EE+YG N GN+
Sbjct: 300 AGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNL 359

Query: 203 YLFGKVKTGGAGGKFHSCCVIVKNMQRCVYAIPRGHVFDNSSLIQPDRD---SEESPASF 33
           YLFGKVK G A   +HSCCV+VKNM+RCVYAIP   VF N  +++ ++D   S  SPA+ 
Sbjct: 360 YLFGKVKAGSA---YHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 416

Query: 32  QAQLHEMASG 3
           + +L ++ASG
Sbjct: 417 RTKLQDVASG 426


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/130 (51%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 AGWQAVSFASNTDMNSDGPAGAHIFDSEEKTDLNLNDDGSLPFYIIDAYEEYYGTNAGNI 204
           AGWQAV    N     +G       + EEK D  L+ DGSLPFYI+DA+EE+YG N GN+
Sbjct: 301 AGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNL 360

Query: 203 YLFGKVKTGGAGGKFHSCCVIVKNMQRCVYAIPRGHVFDNSSLIQPDRD---SEESPASF 33
           YLFGKVK G A   +HSCCV+VKNM+RCVYAIP   VF N  +++ ++D   S  SPA+ 
Sbjct: 361 YLFGKVKAGSA---YHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEASRVSPAAL 417

Query: 32  QAQLHEMASG 3
           + +L ++ASG
Sbjct: 418 RTKLQDVASG 427


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 AGWQAVSFASNTDMNSDGPAGAHIFDSEEKTDLNLNDDGSLPFYIIDAYEEYYGTNAGNI 204
           A WQAV    +  +NS          +EEK++ + + DGSLPFYI+DA+EE +G N G +
Sbjct: 330 AEWQAVRSEGSGSVNSAAEM------AEEKSEFDTDTDGSLPFYIVDAHEELFGANMGTV 383

Query: 203 YLFGKVKTGGAGGKFHSCCVIVKNMQRCVYAIPRGHVFDNSSLIQPDRDSEE---SPASF 33
           YLFGKVK   AG  FHSCCV+VKNMQRC+YAIP      +  +++  +D+EE   SPA  
Sbjct: 384 YLFGKVK---AGDTFHSCCVVVKNMQRCIYAIPSASFLHSDEMLELQKDAEESQLSPADL 440

Query: 32  QAQLHEMASG 3
           +A+L E+ +G
Sbjct: 441 RAKLQEVTAG 450


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 AGWQAVSFASNTDMNSDGPAGAHIFDSEEKTDLNLNDDGSLPFYIIDAYEEYYGTNAGNI 204
           A WQAV    +  +NS          +EEK++ + + DGSLPFYI+DA+EE +G N G +
Sbjct: 330 AEWQAVRSEGSGSVNSAAEM------AEEKSEFDTDTDGSLPFYIVDAHEELFGANMGTV 383

Query: 203 YLFGKVKTGGAGGKFHSCCVIVKNMQRCVYAIPRGHVFDNSSLIQPDRDSEE---SPASF 33
           YLFGKVK   AG  FHSCCV+VKNMQRC+YAIP      +  +++  +D+EE   SPA  
Sbjct: 384 YLFGKVK---AGDTFHSCCVVVKNMQRCIYAIPSASFLHSDEMLELQKDAEESQLSPADL 440

Query: 32  QAQLHEMASG 3
           +A+L E+ +G
Sbjct: 441 RAKLQEVTAG 450


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