BLASTX nr result

ID: Lithospermum22_contig00021955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021955
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   214   2e-53
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   210   2e-52
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   204   2e-50
ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2...   198   9e-49
gb|AFK38566.1| unknown [Medicago truncatula]                          197   3e-48

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  214 bits (545), Expect = 2e-53
 Identities = 96/158 (60%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
 Frame = -1

Query: 626 MGFPVGYTDIYIPKLLVHFLTLLSFFRKIISTFLAFFGLGDFLESENSIQPDPIG-PKHD 450
           MGFPVGYT++ +PKLL+H L++L F RK+I+T   + GL DFLE + S    P   P+  
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETPSRVPEFY 60

Query: 449 SLTAKFIRELLPVMKYSDIIEPPERCAVCLYDFDGNDEIRRLRNCVHIFHKNCLDRWLDH 270
           S +A  IRE+LPV+K+SD+++PP+ CAVCLY+F+ +DEIRRL NC HIFHK CLDRW+ +
Sbjct: 61  SASAVLIREILPVVKFSDLVDPPDSCAVCLYEFEDHDEIRRLTNCRHIFHKACLDRWVGY 120

Query: 269 DQKTCPLCRTQFVPEDMQHAFNERLWLASGISDFYGEF 156
           DQKTCPLCRT  +P+DMQ AFNERLW ASGI DFYG++
Sbjct: 121 DQKTCPLCRTPVIPDDMQEAFNERLWAASGIPDFYGDY 158


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  210 bits (535), Expect = 2e-52
 Identities = 98/167 (58%), Positives = 127/167 (76%), Gaps = 10/167 (5%)
 Frame = -1

Query: 626 MGFPVGYTDIYIPKLLVHFLTLLSFFRKIISTFLAFFGLGDFLE-----SENSIQPDPIG 462
           MGFPVGYT++ +PKLL+H L+LL F RK+IS F  F GL DFLE     +E S Q     
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTEGSTQV---- 56

Query: 461 PKHDSLTAKFIRELLPVMKYSDII-----EPPERCAVCLYDFDGNDEIRRLRNCVHIFHK 297
           P+  S++A  IRE+LPVMK+ +++     +PP++CAVCLY+F+G +EIRRL NC HIFH+
Sbjct: 57  PEFQSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHR 116

Query: 296 NCLDRWLDHDQKTCPLCRTQFVPEDMQHAFNERLWLASGISDFYGEF 156
           +CLDRW+D DQKTCPLCRT F+P+DMQ AFNERLW AS + DFYG++
Sbjct: 117 SCLDRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFYGDY 163


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  204 bits (518), Expect = 2e-50
 Identities = 92/161 (57%), Positives = 122/161 (75%), Gaps = 4/161 (2%)
 Frame = -1

Query: 626 MGFPVGYTDIYIPKLLVHFLTLLSFFRKIISTFLAFFGLGDFLESENS-IQPDPIGPKHD 450
           MGFPVGYT++++PKL +H L+ L F RK+I +   F GL DFLE++ S  +     P++ 
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSETQAQVPEYP 60

Query: 449 SLTAKFIRELLPVMKYSDII---EPPERCAVCLYDFDGNDEIRRLRNCVHIFHKNCLDRW 279
            ++A  IRE+LPVMK+ + +   + PE CAVCLYDF+  +EIRRL NC HIFH++CLDRW
Sbjct: 61  PVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRW 120

Query: 278 LDHDQKTCPLCRTQFVPEDMQHAFNERLWLASGISDFYGEF 156
           +DHDQKTCPLCRT FVP++MQ  FN+RLW ASGI+DFY E+
Sbjct: 121 MDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFYSEY 161


>ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  198 bits (504), Expect = 9e-49
 Identities = 95/165 (57%), Positives = 125/165 (75%), Gaps = 8/165 (4%)
 Frame = -1

Query: 626 MGFPVGYTDIYIPKLLVHFLTLLSFFRKIISTFLAFFGLGDFLE------SENSIQPDPI 465
           MGFPVGY+++ +PKLL+H L++L FFRK+I+T   + GL DFLE      S N+I P  +
Sbjct: 1   MGFPVGYSELLLPKLLLHALSVLGFFRKLINTLFHYLGLPDFLEPNTSSSSTNNIPPFGV 60

Query: 464 GPKHD-SLTAKFIRELLPVMKYSDIIEPP-ERCAVCLYDFDGNDEIRRLRNCVHIFHKNC 291
              H+ S++A  IRE+LPV+K+S++++P  + CAVCLY+F   DEIRRL NC HIFHK C
Sbjct: 61  PEFHNHSVSALLIREILPVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCC 120

Query: 290 LDRWLDHDQKTCPLCRTQFVPEDMQHAFNERLWLASGISDFYGEF 156
           LDRW+ +DQ TCPLCRT  +P+DMQ +FNERLW ASGI DFYGE+
Sbjct: 121 LDRWMGYDQITCPLCRTPVIPDDMQESFNERLWAASGIPDFYGEY 165


>gb|AFK38566.1| unknown [Medicago truncatula]
          Length = 163

 Score =  197 bits (500), Expect = 3e-48
 Identities = 87/159 (54%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
 Frame = -1

Query: 626 MGFPVGYTDIYIPKLLVHFLTLLSFFRKIISTFLAFFGLGDFLES-----ENSIQPDPIG 462
           MGFPVGYT++  PKL++H L++ +F RK+I+T   + GL DF+E      ENS +     
Sbjct: 1   MGFPVGYTELLFPKLVLHLLSIFTFIRKLINTIFRYMGLPDFIEPDIIWPENSTRI---- 56

Query: 461 PKHDSLTAKFIRELLPVMKYSDIIEPPERCAVCLYDFDGNDEIRRLRNCVHIFHKNCLDR 282
           P+ +S++A  IRE+LPV+K+ ++++PPE CAVCL +F+ NDEIRRL NC HIFH+ CLDR
Sbjct: 57  PEFESVSALLIREILPVVKFMELVDPPESCAVCLTEFEENDEIRRLANCRHIFHRGCLDR 116

Query: 281 WLDHDQKTCPLCRTQFVPEDMQHAFNERLWLASGISDFY 165
           W+ +DQ+TCPLCRT F+P+++Q AFNERLW ASGI +F+
Sbjct: 117 WMGYDQRTCPLCRTPFIPDELQSAFNERLWAASGIPEFH 155


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