BLASTX nr result
ID: Lithospermum22_contig00021896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00021896
(2140 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy... 741 0.0
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas... 740 0.0
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2... 733 0.0
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy... 729 0.0
ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B... 719 0.0
>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
product [Vitis vinifera]
Length = 525
Score = 741 bits (1913), Expect = 0.0
Identities = 374/492 (76%), Positives = 423/492 (85%)
Frame = -2
Query: 1971 PAKSTPRKGPVNPARKTQNLNVEISPHRAVSAVRLMRIEFGGAFADLLNEQGKGSGENEM 1792
P +ST G A +T +N+EISPHRAVSAVRLMRIE GGAFADLLNE+GKGSG+NEM
Sbjct: 36 PTRST---GTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNEM 92
Query: 1791 GYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRKYLDYLILSLCHDEKNFGSMEPLLLQI 1612
GYVERTLGFRT LVTDIVGG+IRWR+YLD+LI+SLCHD K F SMEPLLLQI
Sbjct: 93 GYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEPLLLQI 152
Query: 1611 LRMGLYEILKLDMPPYAVLNENVRLAKVALRPGAGNMVNGILRKFVMLNDRDSLPSPKVE 1432
LR+G YEI+ LDMPPYAV++ENVRLAKVALRPGAGNMVN ILRK V+L +++SLP PK+E
Sbjct: 153 LRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAGNMVNAILRKLVLLKEKNSLPLPKLE 212
Query: 1431 GDDRQQARALATIYSHPVWMVRRWTKSFGSQEAIKLMNWNNSVPCFSLRANTARGYTKVE 1252
GDDR QARALAT+YSHPVWMVRRWTK G +EAIKLM WNNS P FSLRAN+ +G+T+ +
Sbjct: 213 GDDRAQARALATLYSHPVWMVRRWTKYLGQEEAIKLMMWNNSEPSFSLRANSGKGFTRAD 272
Query: 1251 LISTLKLLEVPHEPSPHLEDFVRMKTGMQAVIQAGLLKQGLCSVQDESAGLVVSVVDPQP 1072
L+ LK+L+VPHE SPHL++FVR++TGMQ VIQA LLK+GLCSVQDESAGLVVSVVDPQP
Sbjct: 273 LVMRLKMLKVPHELSPHLDNFVRIRTGMQIVIQAQLLKEGLCSVQDESAGLVVSVVDPQP 332
Query: 1071 GESIIDCCAAPGGKTLFMASRLNGHGMVSAIDINEGRLRILKETAKSHGIDNVITTVHSD 892
GESIIDCCAAPGGKT+FMAS L+G GMV AIDIN+GRLRI+KETAK +D+VITTVH+D
Sbjct: 333 GESIIDCCAAPGGKTIFMASCLSGQGMVHAIDINKGRLRIVKETAKLLLVDDVITTVHAD 392
Query: 891 LREVSTTKLGKSDKVLLDAPCSGLGVLSKRADLRWNRRVEDMEQLKHLQDELFDSAARLV 712
L + KSDKVLLDAPCSGLGVLSKRADLRWNR +EDMEQLK+LQDEL D+AA LV
Sbjct: 393 LCTFAKNNPVKSDKVLLDAPCSGLGVLSKRADLRWNRSLEDMEQLKNLQDELLDAAAILV 452
Query: 711 KPCGVLIYSTCSIDSEENEERVAAFLQRHPEFSIDPVNKYVPPSFVTEQGFFSSNPVKHS 532
KP GVL+YSTCSID EENEERVAAFLQRHPEFSIDPV +YVP FVTE GF+ SNPVKH+
Sbjct: 453 KPGGVLVYSTCSIDPEENEERVAAFLQRHPEFSIDPVGRYVPSDFVTEGGFYFSNPVKHA 512
Query: 531 LDGAFAARLVLS 496
LDGAFAARLV S
Sbjct: 513 LDGAFAARLVRS 524
>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
communis] gi|223538010|gb|EEF39623.1| ribosomal RNA small
subunit methyltransferase B, putative [Ricinus communis]
Length = 527
Score = 740 bits (1910), Expect = 0.0
Identities = 373/526 (70%), Positives = 436/526 (82%)
Frame = -2
Query: 2079 MQSTLSFNSFNYARVASSTHCTQHIIKLHKREVQLKPAKSTPRKGPVNPARKTQNLNVEI 1900
M LS + + A + + C +K KR + K + S PRKGPV+P +KTQ LN+E+
Sbjct: 1 MAHVLSLHVYLSADTSKTARCMP--LKFSKRANKPKKSLSAPRKGPVSPLKKTQKLNLEV 58
Query: 1899 SPHRAVSAVRLMRIEFGGAFADLLNEQGKGSGENEMGYVERTLGFRTXXXXXXXXXLVTD 1720
SPHRAVSAVRLMRIE GGAFADLLNE+GKGSGENEMGYVERTLGFRT LVTD
Sbjct: 59 SPHRAVSAVRLMRIEMGGAFADLLNEKGKGSGENEMGYVERTLGFRTKNLDDRDLRLVTD 118
Query: 1719 IVGGTIRWRKYLDYLILSLCHDEKNFGSMEPLLLQILRMGLYEILKLDMPPYAVLNENVR 1540
+VGGTIRWR++LD+LI SL HDE F SMEPLLLQILR+G YEI+KLDMPPYAV++ENVR
Sbjct: 119 VVGGTIRWRRFLDHLICSLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPPYAVVDENVR 178
Query: 1539 LAKVALRPGAGNMVNGILRKFVMLNDRDSLPSPKVEGDDRQQARALATIYSHPVWMVRRW 1360
LAKVALRPGAGNMVNGILRK V+L + +SLP PK+EGD R QARALAT++SHPVWMVRRW
Sbjct: 179 LAKVALRPGAGNMVNGILRKLVLLKENNSLPLPKLEGDARAQARALATLHSHPVWMVRRW 238
Query: 1359 TKSFGSQEAIKLMNWNNSVPCFSLRANTARGYTKVELISTLKLLEVPHEPSPHLEDFVRM 1180
TK G +EAI+LM WNNS P FSLRAN +G T+ +L++ L LL+VP+E SP+ + FVRM
Sbjct: 239 TKYLGQEEAIRLMIWNNSDPSFSLRANGGKGVTRDDLVTRLNLLKVPYELSPYSDHFVRM 298
Query: 1179 KTGMQAVIQAGLLKQGLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGKTLFMASRLNG 1000
+TG+Q V+QAGLLK+G CSVQDESAGLVVS+V+PQPG+SIIDCCAAPGGKT++MAS + G
Sbjct: 299 RTGLQIVLQAGLLKEGFCSVQDESAGLVVSIVNPQPGDSIIDCCAAPGGKTVYMASLMEG 358
Query: 999 HGMVSAIDINEGRLRILKETAKSHGIDNVITTVHSDLREVSTTKLGKSDKVLLDAPCSGL 820
GMV AIDIN+GRLRIL+ETAK H ID VIT V SDLR ++ KSDKVLLDAPCSGL
Sbjct: 359 QGMVYAIDINKGRLRILQETAKLHQIDGVITAVPSDLRVLAENYPMKSDKVLLDAPCSGL 418
Query: 819 GVLSKRADLRWNRRVEDMEQLKHLQDELFDSAARLVKPCGVLIYSTCSIDSEENEERVAA 640
GVLSKRADLRWNRRVED+E+LK+LQDEL D+A+ LVKP G L+YSTCSID EENEERV A
Sbjct: 419 GVLSKRADLRWNRRVEDLEELKNLQDELLDAASTLVKPGGFLVYSTCSIDPEENEERVDA 478
Query: 639 FLQRHPEFSIDPVNKYVPPSFVTEQGFFSSNPVKHSLDGAFAARLV 502
FL RHPEF IDPV++YVPP VTE+GF+SS+PVKHS+DGAFAARLV
Sbjct: 479 FLLRHPEFQIDPVDRYVPPDLVTERGFYSSSPVKHSIDGAFAARLV 524
>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
predicted protein [Populus trichocarpa]
Length = 527
Score = 733 bits (1892), Expect = 0.0
Identities = 366/500 (73%), Positives = 428/500 (85%), Gaps = 3/500 (0%)
Frame = -2
Query: 1992 KREVQLKPAKSTPRKG---PVNPARKTQNLNVEISPHRAVSAVRLMRIEFGGAFADLLNE 1822
KR + K + ST RK P +P RKTQ LN+++SPHRAVSAVRLMRIE GGAFADLLN+
Sbjct: 25 KRIHKPKTSLSTRRKATQSPQSPLRKTQKLNLQVSPHRAVSAVRLMRIEMGGAFADLLND 84
Query: 1821 QGKGSGENEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRKYLDYLILSLCHDEKNF 1642
+GKGSG+NEMGYVERTLGFRT LVTDIVGGTIRWR+YLDYLI SLCHDEK F
Sbjct: 85 KGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAF 144
Query: 1641 GSMEPLLLQILRMGLYEILKLDMPPYAVLNENVRLAKVALRPGAGNMVNGILRKFVMLND 1462
SMEPLLLQILR+G YEI+KLDMP YAV++ENVRLAKV+LRPGAGNMVNGILRK V+L +
Sbjct: 145 RSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAKVSLRPGAGNMVNGILRKLVLLKE 204
Query: 1461 RDSLPSPKVEGDDRQQARALATIYSHPVWMVRRWTKSFGSQEAIKLMNWNNSVPCFSLRA 1282
+SLP PK+EGDDR QARALAT+YSHPVWMVRRWTK G ++AIKLM WNN P FSLRA
Sbjct: 205 SNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKLLGQEKAIKLMMWNNDNPSFSLRA 264
Query: 1281 NTARGYTKVELISTLKLLEVPHEPSPHLEDFVRMKTGMQAVIQAGLLKQGLCSVQDESAG 1102
N+ +G T+ +L+ +L+VPHE S HL+ FVR+KTG+Q VIQAGLLKQGLC+VQDESAG
Sbjct: 265 NSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTGLQIVIQAGLLKQGLCAVQDESAG 324
Query: 1101 LVVSVVDPQPGESIIDCCAAPGGKTLFMASRLNGHGMVSAIDINEGRLRILKETAKSHGI 922
L+VSVV+PQPG+SIIDCCAAPGGKTL+MAS+++G GM+ AIDIN+GRLRI+KETAK H +
Sbjct: 325 LIVSVVNPQPGDSIIDCCAAPGGKTLYMASQMHGQGMLYAIDINKGRLRIVKETAKLHQV 384
Query: 921 DNVITTVHSDLREVSTTKLGKSDKVLLDAPCSGLGVLSKRADLRWNRRVEDMEQLKHLQD 742
D VITT+ SDLR + + KSDKVLLDAPCSGLGVLSKRADLRWNRR+ED+E+LK LQ+
Sbjct: 385 DGVITTIPSDLRTFAESYQLKSDKVLLDAPCSGLGVLSKRADLRWNRRLEDLEELKKLQE 444
Query: 741 ELFDSAARLVKPCGVLIYSTCSIDSEENEERVAAFLQRHPEFSIDPVNKYVPPSFVTEQG 562
EL D+A+ LVKP GVL+YSTCSID EENEERV AFL RHPEF IDPV++YVPP FVT++G
Sbjct: 445 ELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFLLRHPEFRIDPVDRYVPPDFVTKRG 504
Query: 561 FFSSNPVKHSLDGAFAARLV 502
F+SS+PVKHS+DGAFAARL+
Sbjct: 505 FYSSDPVKHSMDGAFAARLI 524
>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
[Glycine max]
Length = 528
Score = 729 bits (1881), Expect = 0.0
Identities = 366/511 (71%), Positives = 424/511 (82%)
Frame = -2
Query: 2034 ASSTHCTQHIIKLHKREVQLKPAKSTPRKGPVNPARKTQNLNVEISPHRAVSAVRLMRIE 1855
+SS+ +KL R + + KG N KTQ LN E+SPHRAVSAVRLMRIE
Sbjct: 16 SSSSSSPSKPLKLPHRTCSTNISIPSTAKGGGNRLLKTQKLNSEVSPHRAVSAVRLMRIE 75
Query: 1854 FGGAFADLLNEQGKGSGENEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRKYLDYL 1675
GGAFADLLNE+GKGSGENEMGYV+RTLGFRT LVTDIVGGTIRWR+YLD+L
Sbjct: 76 LGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHL 135
Query: 1674 ILSLCHDEKNFGSMEPLLLQILRMGLYEILKLDMPPYAVLNENVRLAKVALRPGAGNMVN 1495
I SLCHD K+ SMEPLLLQILR+G YEI+KLDMPPYAV++ENV+LAK ALRPGAGNMVN
Sbjct: 136 ISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVKLAKFALRPGAGNMVN 194
Query: 1494 GILRKFVMLNDRDSLPSPKVEGDDRQQARALATIYSHPVWMVRRWTKSFGSQEAIKLMNW 1315
GILRK V+L +++SLP PKVEGDDR QARALAT+YSHPVWMVRRWTK G +EAIKLM W
Sbjct: 195 GILRKLVVLKEKESLPLPKVEGDDRAQARALATLYSHPVWMVRRWTKYLGQEEAIKLMIW 254
Query: 1314 NNSVPCFSLRANTARGYTKVELISTLKLLEVPHEPSPHLEDFVRMKTGMQAVIQAGLLKQ 1135
NNS P FSLRAN ARG+++ +L++ L L+VPH+ SPHL++FVR+KTG+Q +IQAGLLK+
Sbjct: 255 NNSEPSFSLRANRARGFSRDDLVTQLNALKVPHKLSPHLDEFVRIKTGLQIIIQAGLLKK 314
Query: 1134 GLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGKTLFMASRLNGHGMVSAIDINEGRLR 955
GLCSVQDESAGLVVSVVDPQPGE+IIDCCAAPGGKTL+MAS L+G G V AID+N GRLR
Sbjct: 315 GLCSVQDESAGLVVSVVDPQPGETIIDCCAAPGGKTLYMASHLSGQGKVFAIDVNSGRLR 374
Query: 954 ILKETAKSHGIDNVITTVHSDLREVSTTKLGKSDKVLLDAPCSGLGVLSKRADLRWNRRV 775
ILKETAK H +D VIT +H+DLR + + KS+KVLLDAPCSGLGVLSKRADLRWN+ +
Sbjct: 375 ILKETAKLHQVDGVITAIHADLRTLPDSGQLKSNKVLLDAPCSGLGVLSKRADLRWNKNL 434
Query: 774 EDMEQLKHLQDELFDSAARLVKPCGVLIYSTCSIDSEENEERVAAFLQRHPEFSIDPVNK 595
EDMEQLK LQDEL D+A++LVKP GVL+YSTCSID EEN++RV AFL RH +F IDPV++
Sbjct: 435 EDMEQLKELQDELLDAASKLVKPGGVLVYSTCSIDPEENDDRVVAFLARHSDFHIDPVDR 494
Query: 594 YVPPSFVTEQGFFSSNPVKHSLDGAFAARLV 502
YVPP F T GFF SNPVKHSLDG+FAARLV
Sbjct: 495 YVPPDFETSSGFFFSNPVKHSLDGSFAARLV 525
>ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B [Arabidopsis
thaliana] gi|18176252|gb|AAL60011.1| putative sun protein
fmu [Arabidopsis thaliana] gi|21436219|gb|AAM51397.1|
putative sun protein fmu [Arabidopsis thaliana]
gi|110740623|dbj|BAE98415.1| putative sun (fmu) protein
[Arabidopsis thaliana] gi|332641785|gb|AEE75306.1|
ribosomal RNA small subunit methyltransferase B
[Arabidopsis thaliana]
Length = 523
Score = 719 bits (1856), Expect = 0.0
Identities = 359/497 (72%), Positives = 415/497 (83%)
Frame = -2
Query: 1992 KREVQLKPAKSTPRKGPVNPARKTQNLNVEISPHRAVSAVRLMRIEFGGAFADLLNEQGK 1813
KR + + S R+GPV P+RK+QNLN+E+SPHRAVSAVRLMRIE+GGAFADLLNE+GK
Sbjct: 24 KRTQKTRKPFSPDRRGPVAPSRKSQNLNLEVSPHRAVSAVRLMRIEYGGAFADLLNEKGK 83
Query: 1812 GSGENEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRKYLDYLILSLCHDEKNFGSM 1633
GSG NEM YVERT+GFRT LVTD+VGGTIRWR+YLD+LI SLCH+E+ F +M
Sbjct: 84 GSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWRRYLDHLIGSLCHNERTFRNM 143
Query: 1632 EPLLLQILRMGLYEILKLDMPPYAVLNENVRLAKVALRPGAGNMVNGILRKFVMLNDRDS 1453
EPLLLQILR+G+YEI+K DMPPYAV++ENVRLAKVALRPGAG+ VNGILRK V L ++D+
Sbjct: 144 EPLLLQILRIGVYEIIKRDMPPYAVVDENVRLAKVALRPGAGDFVNGILRKLVSLKEKDA 203
Query: 1452 LPSPKVEGDDRQQARALATIYSHPVWMVRRWTKSFGSQEAIKLMNWNNSVPCFSLRANTA 1273
LP PKVEGDDR QARALAT++SHPVWMVRRW K G EA KLM WNN+ P FSLRANT
Sbjct: 204 LPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLGLDEATKLMIWNNNDPGFSLRANTG 263
Query: 1272 RGYTKVELISTLKLLEVPHEPSPHLEDFVRMKTGMQAVIQAGLLKQGLCSVQDESAGLVV 1093
R T+ +L+ L L+VPHE S HLE+FVR+KTG+Q V+QAGLLK+G+CSVQDESAGL+V
Sbjct: 264 RDITRADLVERLNSLKVPHELSLHLEEFVRIKTGLQTVVQAGLLKEGICSVQDESAGLIV 323
Query: 1092 SVVDPQPGESIIDCCAAPGGKTLFMASRLNGHGMVSAIDINEGRLRILKETAKSHGIDNV 913
SVV PQPGE I+D CAAPGGKTLFMAS L G GM+ A+D+NEGRLRIL ETAKSH +D +
Sbjct: 324 SVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIYAMDVNEGRLRILGETAKSHQVDGL 383
Query: 912 ITTVHSDLREVSTTKLGKSDKVLLDAPCSGLGVLSKRADLRWNRRVEDMEQLKHLQDELF 733
ITT+HSDLR + T + DKVLLDAPCSGLGVLSKRADLRWNR++EDM +L LQDEL
Sbjct: 384 ITTIHSDLRVFAETNEVQYDKVLLDAPCSGLGVLSKRADLRWNRKLEDMLELTKLQDELL 443
Query: 732 DSAARLVKPCGVLIYSTCSIDSEENEERVAAFLQRHPEFSIDPVNKYVPPSFVTEQGFFS 553
DSA++LVK GVL+YSTCSID EENE RV AFL RHPEF+IDPV +VP SFVT QGFF
Sbjct: 444 DSASKLVKHGGVLVYSTCSIDPEENEGRVEAFLLRHPEFTIDPVTSFVPSSFVTSQGFFL 503
Query: 552 SNPVKHSLDGAFAARLV 502
SNPVKHSLDGAFAARLV
Sbjct: 504 SNPVKHSLDGAFAARLV 520