BLASTX nr result

ID: Lithospermum22_contig00021895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021895
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   138   5e-31
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]   138   5e-31
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...   137   9e-31
ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glyc...   134   8e-30

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/80 (77%), Positives = 74/80 (92%)
 Frame = +3

Query: 21   TNRTKIVDFTQPYIESGLVILARTRKLRSTAWAFLRPFSPLMWGVTAAFCLIVGAVVWIL 200
            TNRTK VDFTQPYIESGLV++A  +KL S+AWAFL+PFSPLMWG+TA+F LIVGAVVWIL
Sbjct: 773  TNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWIL 832

Query: 201  EHRVNDEFRGSPKKQLMTVL 260
            EHR+ND+FRG PKKQ++T+L
Sbjct: 833  EHRINDDFRGPPKKQIVTML 852


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/80 (77%), Positives = 74/80 (92%)
 Frame = +3

Query: 21  TNRTKIVDFTQPYIESGLVILARTRKLRSTAWAFLRPFSPLMWGVTAAFCLIVGAVVWIL 200
           TNRTK VDFTQPYIESGLV++A  +KL S+AWAFL+PFSPLMWG+TA+F LIVGAVVWIL
Sbjct: 543 TNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWIL 602

Query: 201 EHRVNDEFRGSPKKQLMTVL 260
           EHR+ND+FRG PKKQ++T+L
Sbjct: 603 EHRINDDFRGPPKKQIVTML 622


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/80 (77%), Positives = 74/80 (92%)
 Frame = +3

Query: 21  TNRTKIVDFTQPYIESGLVILARTRKLRSTAWAFLRPFSPLMWGVTAAFCLIVGAVVWIL 200
           TNRTK VDFTQPYIESGLV++A  +KL S+AWAFL+PFSPLMWG+TA+F LIVGAVVWIL
Sbjct: 585 TNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWIL 644

Query: 201 EHRVNDEFRGSPKKQLMTVL 260
           EHR+ND+FRG PKKQ++T+L
Sbjct: 645 EHRINDDFRGPPKKQIVTML 664


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 900

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/80 (80%), Positives = 71/80 (88%)
 Frame = +3

Query: 21  TNRTKIVDFTQPYIESGLVILARTRKLRSTAWAFLRPFSPLMWGVTAAFCLIVGAVVWIL 200
           TNRTKIVDFTQPYIESGLV++A  +K  S AWAFLRPFSPLMW VTA F LIVGAVVWIL
Sbjct: 544 TNRTKIVDFTQPYIESGLVVVAPVKKRNSNAWAFLRPFSPLMWAVTAMFFLIVGAVVWIL 603

Query: 201 EHRVNDEFRGSPKKQLMTVL 260
           EHR+NDEFRG P+KQL+T+L
Sbjct: 604 EHRINDEFRGPPRKQLVTIL 623


>ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glycine max]
          Length = 915

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/80 (77%), Positives = 72/80 (90%)
 Frame = +3

Query: 21  TNRTKIVDFTQPYIESGLVILARTRKLRSTAWAFLRPFSPLMWGVTAAFCLIVGAVVWIL 200
           T+RTKIVDFTQPYIESGLV++A  +KL+S AWAFLRPF+P MWGVTA F L VGAVVWIL
Sbjct: 548 TDRTKIVDFTQPYIESGLVVVAPVKKLKSNAWAFLRPFTPQMWGVTAFFFLFVGAVVWIL 607

Query: 201 EHRVNDEFRGSPKKQLMTVL 260
           EHR NDEFRGSP++Q++TVL
Sbjct: 608 EHRTNDEFRGSPREQIVTVL 627


Top