BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021880
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   139   2e-31
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   138   4e-31
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     138   5e-31
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   133   1e-29
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   133   2e-29

>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/116 (56%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341 WKLVPKPPSCSVVDCKWLFKVKQE---TNKVRFKARLVAKGFTQKEGIDYAEIFALVVKF 171
           W LV KP +  ++ C+WLFK+K        VRFKARLVAKG+TQ+EG+DY EIFA VVK 
Sbjct: 549 WDLVDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKGYTQREGVDYQEIFAPVVKH 608

Query: 170 TTVRIMLALVAHFNWELKQMDVTTAFLHGDLDKNIYMHQPEGFVDPKLPNNVCLLK 3
           T++R+++++V   + EL+QMDV TAFLHGDL++ +YM QPEGF+  K  + VCLLK
Sbjct: 609 TSIRVLMSVVVDQDMELEQMDVKTAFLHGDLEEELYMEQPEGFITDKTKDKVCLLK 664


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/116 (56%), Positives = 88/116 (75%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341  WKLVPKPPSCSVVDCKWLFKVKQETNK---VRFKARLVAKGFTQKEGIDYAEIFALVVKF 171
            W+LVP P     VDCKWLFK+K   +     ++K+RLVAKGF+QKEGIDY E+F+ VVK 
Sbjct: 946  WELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKH 1005

Query: 170  TTVRIMLALVAHFNWELKQMDVTTAFLHGDLDKNIYMHQPEGFVDPKLPNNVCLLK 3
             ++R++LA+V+ FN EL Q+DV TAFLHG+L++ IYM QPEGFVD +  ++VC LK
Sbjct: 1006 KSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLK 1061


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/116 (55%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341  WKLVPKPPSCSVVDCKWLFKVKQ---ETNKVRFKARLVAKGFTQKEGIDYAEIFALVVKF 171
            W+LVPKP    +V CKW+F+ K+   E + + +KARLVAKG++QKEG+DY EIF+ VVK 
Sbjct: 814  WELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKH 873

Query: 170  TTVRIMLALVAHFNWELKQMDVTTAFLHGDLDKNIYMHQPEGFVDPKLPNNVCLLK 3
            T++R++L++ A ++ E++QMDV TAFLHGDL+++IYM QPEGFV+    N VC LK
Sbjct: 874  TSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLK 929


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341 WKLVPKPPSCSVVDCKWLFKVKQE---TNKVRFKARLVAKGFTQKEGIDYAEIFALVVKF 171
           W LV KP    ++ C+WLFK+K        VR+KARLVAKG+TQ+EG+DY EIFA VVK 
Sbjct: 102 WVLVDKPQDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYTQREGVDYQEIFAPVVKH 161

Query: 170 TTVRIMLALVAHFNWELKQMDVTTAFLHGDLDKNIYMHQPEGFVDPKLPNNVCLLK 3
           T +RI++++V   + EL+QMDV TAFLHG+L++ +YM QPEGF+     N VCLLK
Sbjct: 162 TFIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGFISEDGKNKVCLLK 217


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341  WKLVPKPPSCSVVDCKWLFKVKQETNKV---RFKARLVAKGFTQKEGIDYAEIFALVVKF 171
            W LV KP    ++ C+WLFK+K     V   RFKARLVAKG+TQ+EG+DY EIFA VVK 
Sbjct: 871  WDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKH 930

Query: 170  TTVRIMLALVAHFNWELKQMDVTTAFLHGDLDKNIYMHQPEGFVDPKLPNNVCLLK 3
             ++RI+++LV   + EL+QMDV T FLHGDL++ +YM QPEGFV     N VC LK
Sbjct: 931  VSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLK 986