BLASTX nr result

ID: Lithospermum22_contig00021872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021872
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15033.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   120   2e-25
ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arab...   118   5e-25
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...   115   4e-24
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin...   115   4e-24

>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  127 bits (320), Expect = 9e-28
 Identities = 68/155 (43%), Positives = 91/155 (58%)
 Frame = +2

Query: 5   TAPDHGVKDVLVRYARLQMNLVRGSSDASMFSXXXXXXXXXXXXNMYTSTLSSTRNDITK 184
           T+ D G+KD ++ YARLQ+NL RG++D S                   S+ S   +D TK
Sbjct: 274 TSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNISSTSVPWSDTTK 333

Query: 185 DDKYGTLTSSHRGILELSAHVFHRACISAPKASVSMKRVRREHLVVLMKEGLEKGKWPWH 364
           DD+ GTLTSS  G++EL+A VF+RAC +  KA  + KR +REH     +EGL KGKW W+
Sbjct: 334 DDRLGTLTSSQCGLVELAALVFYRACANPLKAPSTAKRAKREHAAAYFREGLMKGKWLWN 393

Query: 365 VAFCFLMRKYGLRIREDVLSYCFETIHDSLDR*LS 469
            AFC L   Y  RI +D+  Y FE I  S +R L+
Sbjct: 394 AAFCCLTHNYHTRICKDLFVYWFEGICTSFERILN 428


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
           gi|223550511|gb|EEF51998.1| ataxia telangiectasia
           mutated, putative [Ricinus communis]
          Length = 2954

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/142 (40%), Positives = 90/142 (63%)
 Frame = +2

Query: 44  YARLQMNLVRGSSDASMFSXXXXXXXXXXXXNMYTSTLSSTRNDITKDDKYGTLTSSHRG 223
           + RLQ+NL RG+S++                    ++++    D TKD+K+GTLT S  G
Sbjct: 225 FIRLQLNLTRGASESGSMVEQFLDVVCKELDQSSLTSITVPWMDATKDEKFGTLTGSQCG 284

Query: 224 ILELSAHVFHRACISAPKASVSMKRVRREHLVVLMKEGLEKGKWPWHVAFCFLMRKYGLR 403
           ++EL+A + ++AC+S PKA  + KR++REH  VL+KE L+KGKW W+ AFC+L+R Y  R
Sbjct: 285 LVELAALLLYQACVSTPKAQSTEKRIKREHATVLLKEALKKGKWLWNAAFCYLIRNYCSR 344

Query: 404 IREDVLSYCFETIHDSLDR*LS 469
           + +D++ Y F+ I  S +R L+
Sbjct: 345 MNKDLIIYWFDGISTSFERILN 366


>ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp.
            lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein
            ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata]
          Length = 3832

 Score =  118 bits (296), Expect = 5e-25
 Identities = 62/152 (40%), Positives = 91/152 (59%)
 Frame = +2

Query: 5    TAPDHGVKDVLVRYARLQMNLVRGSSDASMFSXXXXXXXXXXXXNMYTSTLSSTRNDITK 184
            T  D  +K++LV Y RLQ+NL RGSS++S               ++ +S+ S++  D TK
Sbjct: 1063 TTHDKNLKEILVSYGRLQLNLTRGSSESSSL-VEQLLDVVTRELDLGSSSTSASWGDTTK 1121

Query: 185  DDKYGTLTSSHRGILELSAHVFHRACISAPKASVSMKRVRREHLVVLMKEGLEKGKWPWH 364
            D+K G L S    ++EL+AHVF+RAC++  + S+S KR RR+H+ + M + L +GKW W 
Sbjct: 1122 DEKLGALNSYQNSLVELAAHVFYRACVNTSRPSMSEKRARRQHIAMRMVDALTEGKWLWC 1181

Query: 365  VAFCFLMRKYGLRIREDVLSYCFETIHDSLDR 460
             AF  L+R Y  RI  D+L Y FE I  +  R
Sbjct: 1182 AAFGCLVRNYCARINMDLLIYWFEAICTNFQR 1213


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/152 (40%), Positives = 91/152 (59%)
 Frame = +2

Query: 5    TAPDHGVKDVLVRYARLQMNLVRGSSDASMFSXXXXXXXXXXXXNMYTSTLSSTRNDITK 184
            T  D  +K++LV Y RLQ+NL R SS++S               ++ +S+ S++  D TK
Sbjct: 1085 TTHDKNLKEILVSYGRLQLNLTRDSSESSSL-VEQLLDVVTRELDLGSSSSSASWGDTTK 1143

Query: 185  DDKYGTLTSSHRGILELSAHVFHRACISAPKASVSMKRVRREHLVVLMKEGLEKGKWPWH 364
            D+K G L+S    ++EL+AHVF+RAC++  + S+S KR RR+H+ + M + L +GKW W 
Sbjct: 1144 DEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGKWLWC 1203

Query: 365  VAFCFLMRKYGLRIREDVLSYCFETIHDSLDR 460
             AF  L+R Y  RI  D+L Y FE I  +  R
Sbjct: 1204 AAFGCLVRNYCARINMDLLIYWFEAICTNFQR 1235


>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
            Full=Ataxia telangiectasia mutated homolog; Short=AtATM
            gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
          Length = 3856

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/152 (40%), Positives = 91/152 (59%)
 Frame = +2

Query: 5    TAPDHGVKDVLVRYARLQMNLVRGSSDASMFSXXXXXXXXXXXXNMYTSTLSSTRNDITK 184
            T  D  +K++LV Y RLQ+NL R SS++S               ++ +S+ S++  D TK
Sbjct: 1085 TTHDKNLKEILVSYGRLQLNLTRDSSESSSL-VEQLLDVVTRELDLGSSSSSASWGDTTK 1143

Query: 185  DDKYGTLTSSHRGILELSAHVFHRACISAPKASVSMKRVRREHLVVLMKEGLEKGKWPWH 364
            D+K G L+S    ++EL+AHVF+RAC++  + S+S KR RR+H+ + M + L +GKW W 
Sbjct: 1144 DEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGKWLWC 1203

Query: 365  VAFCFLMRKYGLRIREDVLSYCFETIHDSLDR 460
             AF  L+R Y  RI  D+L Y FE I  +  R
Sbjct: 1204 AAFGCLVRNYCARINMDLLIYWFEAICTNFQR 1235


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